RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 GALNT18Q6P9A2 607 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 RAB11FIP2Q7L804 512 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 TMC6Q7Z403 805 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 ZNF804AQ7Z570 1209 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 ADCK1Q86TW2 530 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CTAGE6Q86UF2 777 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CABP7Q86V35 215 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 KRT73Q86Y46 540 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CCDC83Q8IWF9 413 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CTAGE4Q8IX94 777 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 TSPYL6Q8N831 410 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 RNF152Q8N8N0 203 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 HIPK4Q8NE63 616 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CEP70Q8NHQ1 597 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 IL31RAQ8NI17 732 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 ERMNQ8TAM6 284 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 ADAMTS15Q8TE58 950 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 DACT3Q96B18 629 aaPredicted RBP4.8□□□□□ -1.64
RTN4-213ENST00000485749 SUCLG2Q96I99 432 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 HHIPL1Q96JK4 782 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 PPP1R13BQ96KQ4 1090 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 GAL3ST1Q99999 423 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 TCF25Q9BQ70 676 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 ADI1Q9BV57 179 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CNPPD1Q9BV87 410 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 NACAP1Q9BZK3 213 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 PITHD1Q9GZP4 211 aaPredicted RBP4.8□□□□□ -1.64
RTN4-213ENST00000485749 AP5M1Q9H0R1 490 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 TRPV6Q9H1D0 765 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 EHD1Q9H4M9 534 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 NRDE2Q9H7Z3 1164 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 PDE7BQ9NP56 450 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CD93Q9NPY3 652 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 AKAP7Q9P0M2 348 aaPredicted RBP4.8□□□□□ -1.64
RTN4-213ENST00000485749 BTBD7Q9P203 1132 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 GRHPRQ9UBQ7 328 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 FBXO40Q9UH90 709 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 ITGB1BP2Q9UKP3 347 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 ACSL6Q9UKU0 697 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 EXOC7Q9UPT5 735 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 PRELID1Q9Y255 219 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 PCDHB4Q9Y5E5 795 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 PCDHGB2Q9Y5G2 931 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 CAPN7Q9Y6W3 813 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.8□□□□□ -1.64
RTN4-213ENST00000485749 KIF27Q86VH2 1401 aa4.8□□□□□ -1.64
RTN4-213ENST00000485749 hCG_1807616A0A1W2PRN6 198 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 TCRBV5S2A0A599 114 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 ZC3H12DA2A288 527 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 RGSL1A5PLK6 1076 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 POM121BA6NF01 834 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 GPR89AB7ZAQ6 455 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 TISP43B9A030 160 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 B9A039 149 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 L7N2F9 121 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 ACOT7O00154 380 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 MYO1FO00160 1098 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 TAF4O00268 1085 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 SPOPO43791 374 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 NRP2O60462 931 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 PLA2G6O60733 806 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 SMPD2O60906 423 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 SLITRK3O94933 977 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 APOL3O95236 402 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 NTRK1P04629 796 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 ADRB2P07550 413 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 QDPRP09417 244 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 GPR89BP0CG08 455 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CKMT1AP12532 417 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 GSPT1P15170 499 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 PORP16435 677 aaPredicted RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 ZNF3P17036 446 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 EEF1DP29692 281 aaKnown RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 HOXA11P31270 313 aaPredicted RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 HNMTP50135 292 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 NR1H2P55055 460 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CASP6P55212 293 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 RWDD2BP57060 319 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 BEX3Q00994 111 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CD83Q01151 205 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 SLC6A3Q01959 620 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 YWHAHQ04917 246 aaPredicted RBP4.79□□□□□ -1.64
RTN4-213ENST00000485749 CHAF1BQ13112 559 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CBX3Q13185 183 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 GPS2Q13227 327 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 SLC14A1Q13336 389 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 ERV3-1Q14264 604 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CNGA2Q16280 664 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 KBTBD12Q3ZCT8 623 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CCDC157Q569K6 752 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 TOR1AIP1Q5JTV8 583 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 UBXN11Q5T124 520 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 TPGS2Q68CL5 300 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 TMEM154Q6P9G4 183 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CNKSR3Q6P9H4 555 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 CORO6Q6QEF8 472 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 LMBR1LQ6UX01 489 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 BNIPLQ7Z465 357 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 SLFN11Q7Z7L1 901 aa4.79□□□□□ -1.64
RTN4-213ENST00000485749 RSPH3Q86UC2 560 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms