RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 BTBD8Q5XKL5 378 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 NAIF1Q69YI7 327 aaPredicted RBP14.59□□□□□ -0.07
VARS-225ENST00000482996 RHBDF2Q6PJF5 856 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 LCLAT1Q6UWP7 414 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 GBP6Q6ZN66 633 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 HTR3DQ70Z44 454 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 ENOSF1Q7L5Y1 443 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 SCD5Q86SK9 330 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 ARHGEF19Q8IW93 802 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 SIX6OS1Q8N1H7 587 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 RBBP8NLQ8NC74 664 aaPredicted RBP14.59□□□□□ -0.07
VARS-225ENST00000482996 UBA3Q8TBC4 463 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 FAM81BQ96LP2 452 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 THAP9Q9H5L6 903 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 SLC8A2Q9UPR5 921 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 FANCMQ8IYD8 2048 aa14.59□□□□□ -0.07
VARS-225ENST00000482996 OTOGLQ3ZCN5 2332 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.58□□□□□ -0.08
VARS-225ENST00000482996 CHURC1-FNTBB4DL54 471 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 LILRB5O75023 590 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 KRT5P13647 590 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 OPRD1P41143 372 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 EIF2DP41214 584 aaKnown RBP14.58□□□□□ -0.08
VARS-225ENST00000482996 CNGA2Q16280 664 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 DPCR1Q3MIW9 517 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 PREPLQ4J6C6 727 aaPredicted RBP14.58□□□□□ -0.08
VARS-225ENST00000482996 CT47A1Q5JQC4 288 aaPredicted RBP14.58□□□□□ -0.08
VARS-225ENST00000482996 RSRC2Q7L4I2 434 aaKnown RBP14.58□□□□□ -0.08
VARS-225ENST00000482996 BBS7Q8IWZ6 715 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 TFAP2BQ92481 460 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 ACDQ96AP0 544 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 KREMEN1Q96MU8 473 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 MED15Q96RN5 788 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 PNKPQ96T60 521 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 CRACR2AQ9BSW2 395 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 ULBP1Q9BZM6 244 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 UBE2TQ9NPD8 197 aaPredicted RBP14.58□□□□□ -0.08
VARS-225ENST00000482996 NUDT5Q9UKK9 219 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 STRIP2Q9ULQ0 834 aa14.58□□□□□ -0.08
VARS-225ENST00000482996 ZNF292O60281 2723 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 K7ESF4 209 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 M0QYV0 167 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 RNF225M0QZC1 329 aaPredicted RBP14.57□□□□□ -0.08
VARS-225ENST00000482996 TULP2O00295 520 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 MDM4O15151 490 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 APODP05090 189 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 BRD2P25440 801 aaKnown RBP14.57□□□□□ -0.08
VARS-225ENST00000482996 HOXA6P31267 233 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 FNTBP49356 437 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 ZNF132P52740 706 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 MFAP3P55082 362 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 YWHAGP61981 247 aaKnown RBP eCLIP14.57□□□□□ -0.08
VARS-225ENST00000482996 COG7P83436 770 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 ADIGQ0VDE8 80 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 EFEMP1Q12805 493 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 EXOC3L4Q17RC7 722 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 GAB4Q2WGN9 574 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 ANO4Q32M45 955 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 PKDCCQ504Y2 493 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 HEATR6Q6AI08 1181 aaKnown RBP14.57□□□□□ -0.08
VARS-225ENST00000482996 PM20D1Q6GTS8 502 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 PKN3Q6P5Z2 889 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 LONP2Q86WA8 852 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 MIB1Q86YT6 1006 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 IRF2BP1Q8IU81 584 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 RPLP0P6Q8NHW5 317 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 KCTD13Q8WZ19 329 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 WBP2Q969T9 261 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 HINFPQ9BQA5 517 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 SPHK2Q9NRA0 654 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 RASAL2Q9UJF2 1139 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 RAB23Q9ULC3 237 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.57□□□□□ -0.08
VARS-225ENST00000482996 ZNF510Q9Y2H8 683 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 ATG2BQ96BY7 2078 aa14.57□□□□□ -0.08
VARS-225ENST00000482996 GTPBP10A4D1E9 387 aaKnown RBP14.56□□□□□ -0.08
VARS-225ENST00000482996 HOXC11O43248 304 aaPredicted RBP14.56□□□□□ -0.08
VARS-225ENST00000482996 CNR2P34972 360 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 MAN2A1Q16706 1144 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 TRIM65Q6PJ69 517 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 NUDT18Q6ZVK8 323 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 SUMF1Q8NBK3 374 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 RNF139Q8WU17 664 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 RUBCNQ92622 972 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 SECISBP2LQ93073 1101 aaKnown RBP14.56□□□□□ -0.08
VARS-225ENST00000482996 HSFY1Q96LI6 401 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 DCLK3Q9C098 648 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 EPC1Q9H2F5 836 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 CNGB3Q9NQW8 809 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 ARHGEF4Q9NR80 690 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 OLA1Q9NTK5 396 aaKnown RBP14.56□□□□□ -0.08
VARS-225ENST00000482996 C2orf42Q9NWW7 574 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 MARCH2Q9P0N8 246 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 WDR35Q9P2L0 1181 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 SMG5Q9UPR3 1016 aaKnown RBP14.56□□□□□ -0.08
VARS-225ENST00000482996 CNTN6Q9UQ52 1028 aa14.56□□□□□ -0.08
VARS-225ENST00000482996 MYOFQ9NZM1 2061 aa14.55□□□□□ -0.08
VARS-225ENST00000482996 MED7O43513 233 aa14.55□□□□□ -0.08
VARS-225ENST00000482996 GREM1O60565 184 aa14.55□□□□□ -0.08
VARS-225ENST00000482996 STC2O76061 302 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms