RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 TTC39CQ8N584 583 aa17.55■□□□□ 0.4
PHF1-207ENST00000479029 NAT16Q8N8M0 369 aa17.55■□□□□ 0.4
PHF1-207ENST00000479029 IL17RCQ8NAC3 791 aa17.55■□□□□ 0.4
PHF1-207ENST00000479029 TXNDC5Q8NBS9 432 aaKnown RBP17.55■□□□□ 0.4
PHF1-207ENST00000479029 WHAMMQ8TF30 809 aa17.55■□□□□ 0.4
PHF1-207ENST00000479029 DDX1Q92499 740 aaKnown RBP17.55■□□□□ 0.4
PHF1-207ENST00000479029 EEF2KMTQ96G04 330 aa17.55■□□□□ 0.4
PHF1-207ENST00000479029 FAXDC2Q96IV6 333 aa17.55■□□□□ 0.4
PHF1-207ENST00000479029 KLF16Q9BXK1 252 aaPredicted RBP17.55■□□□□ 0.4
PHF1-207ENST00000479029 INVSQ9Y283 1065 aa17.55■□□□□ 0.4
PHF1-207ENST00000479029 HHLA1C9JL84 531 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 CYP26A1O43174 497 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 TULP3O75386 442 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 EPB41P11171 864 aaKnown RBP17.54■□□□□ 0.4
PHF1-207ENST00000479029 KIR2DL1P43626 348 aaPredicted RBP17.54■□□□□ 0.4
PHF1-207ENST00000479029 LIMK1P53667 647 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 CREB5Q02930 508 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 PNOCQ13519 176 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 EMC10Q5UCC4 262 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 ETFBKMTQ8IXQ9 262 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 FBXL13Q8NEE6 735 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 MDGA1Q8NFP4 955 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 KCNV2Q8TDN2 545 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 WBP2Q969T9 261 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 HEXIM2Q96MH2 286 aaKnown RBP17.54■□□□□ 0.4
PHF1-207ENST00000479029 DUSP16Q9BY84 665 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 TPSD1Q9BZJ3 242 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 POLMQ9NP87 494 aaPredicted RBP17.54■□□□□ 0.4
PHF1-207ENST00000479029 LSM7Q9UK45 103 aaKnown RBP17.54■□□□□ 0.4
PHF1-207ENST00000479029 CHD8Q9HCK8 2581 aa17.54■□□□□ 0.4
PHF1-207ENST00000479029 SGK1O00141 431 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 PLA2G4AP47712 749 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 PSEN1P49768 467 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 MXI1P50539 228 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 KIF11P52732 1056 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 ZNF394Q53GI3 561 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 PPM1JQ5JR12 505 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 KLHDC10Q6PID8 442 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 TMEM92Q6UXU6 159 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 TADA2BQ86TJ2 420 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 FMR1NBQ8N0W7 255 aaPredicted RBP17.53■□□□□ 0.4
PHF1-207ENST00000479029 PHTF2Q8N3S3 785 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 SEMA4DQ92854 862 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 TSG101Q99816 390 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.53■□□□□ 0.4
PHF1-207ENST00000479029 OSER1Q9NX31 292 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 RAB20Q9NX57 234 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 DNMT3LQ9UJW3 386 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 NAGPAQ9UK23 515 aa17.53■□□□□ 0.4
PHF1-207ENST00000479029 MYOFQ9NZM1 2061 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 A0A1W2PQH9 124 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 BCLAF3A2AJT9 711 aaKnown RBP17.52■□□□□ 0.4
PHF1-207ENST00000479029 GREM1O60565 184 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 SMC2O95347 1197 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 CAVIN2O95810 425 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 CHRM1P11229 460 aaPredicted RBP17.52■□□□□ 0.4
PHF1-207ENST00000479029 RARGP13631 454 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 PRCPP42785 496 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 BECN1Q14457 450 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 C10orf120Q5SQS8 335 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 PPP1R26Q5T8A7 1209 aaPredicted RBP17.52■□□□□ 0.4
PHF1-207ENST00000479029 TRMT11Q7Z4G4 463 aaKnown RBP17.52■□□□□ 0.4
PHF1-207ENST00000479029 GSDMAQ96QA5 445 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 SMOC1Q9H4F8 434 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 FAM124BQ9H5Z6 455 aaPredicted RBP17.52■□□□□ 0.4
PHF1-207ENST00000479029 NMUR1Q9HB89 426 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 RXFP3Q9NSD7 469 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 CISHQ9NSE2 258 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 BCCIPQ9P287 314 aaKnown RBP eCLIP17.52■□□□□ 0.4
PHF1-207ENST00000479029 WDR35Q9P2L0 1181 aa17.52■□□□□ 0.4
PHF1-207ENST00000479029 ABCA7Q8IZY2 2146 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 ADAM23O75077 832 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 RALAP11233 206 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 HNRNPLP14866 589 aaKnown RBP eCLIP17.51■□□□□ 0.39
PHF1-207ENST00000479029 C10orf76Q5T2E6 689 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 STPG1Q5TH74 334 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 ZNF658Q5TYW1 1059 aaPredicted RBP17.51■□□□□ 0.39
PHF1-207ENST00000479029 PMS2CLQ68D20 193 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 GRAMD4Q6IC98 578 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 CCDC186Q7Z3E2 898 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 ZNF276Q8N554 614 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 ZNF513Q8N8E2 541 aaPredicted RBP17.51■□□□□ 0.39
PHF1-207ENST00000479029 OLIG1Q8TAK6 271 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 TMEM176AQ96HP8 235 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 XPO6Q96QU8 1125 aaKnown RBP17.51■□□□□ 0.39
PHF1-207ENST00000479029 CDK5RAP1Q96SZ6 601 aaKnown RBP17.51■□□□□ 0.39
PHF1-207ENST00000479029 BBS2Q9BXC9 721 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 GTPBP4Q9BZE4 634 aaKnown RBP17.51■□□□□ 0.39
PHF1-207ENST00000479029 ZDHHC4Q9NPG8 344 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 CLIC5Q9NZA1 410 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 HOOK1Q9UJC3 728 aaKnown RBP17.51■□□□□ 0.39
PHF1-207ENST00000479029 NUDT5Q9UKK9 219 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 CIZ1Q9ULV3 898 aaPredicted RBP17.51■□□□□ 0.39
PHF1-207ENST00000479029 USP3Q9Y6I4 520 aa17.51■□□□□ 0.39
PHF1-207ENST00000479029 MYH10P35580 1976 aa17.5■□□□□ 0.39
PHF1-207ENST00000479029 GON4LQ3T8J9 2241 aa17.5■□□□□ 0.39
PHF1-207ENST00000479029 NEDD8-MDP1E9PL57 170 aa17.5■□□□□ 0.39
PHF1-207ENST00000479029 SLC16A3O15427 465 aaKnown RBP17.5■□□□□ 0.39
PHF1-207ENST00000479029 MAP3K13O43283 966 aa17.5■□□□□ 0.39
PHF1-207ENST00000479029 ADRB1P08588 477 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms