RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 DXOO77932 396 aaKnown RBP7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 CTDNEP1O95476 244 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 CISD3P0C7P0 127 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 MBL2P11226 248 aaPredicted RBP7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 FDPSP14324 419 aaKnown RBP7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 GLDCP23378 1020 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 GUCY2CP25092 1073 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 ZNF132P52740 706 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 SMTNP53814 917 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 PCBP4P57723 403 aaKnown RBP7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 NOP14P78316 857 aaKnown RBP7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 NFATC3Q12968 1075 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 ILKQ13418 452 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 SERINC3Q13530 473 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 ENPP2Q13822 863 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 UBAP2LQ14157 1087 aaKnown RBP7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 SHBQ15464 509 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 INAVAQ3KP66 663 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 PRAMEF14Q5SWL7 426 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 LAYNQ6UX15 382 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 VSTM1Q6UX27 236 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 OSTM1Q86WC4 334 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 GATAD2AQ86YP4 633 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 BBS7Q8IWZ6 715 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 DHX40Q8IX18 779 aaKnown RBP7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 TMEM86AQ8N2M4 240 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 EXD3Q8N9H8 876 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 SAP25Q8TEE9 199 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 TIPINQ9BVW5 301 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 C6orf106Q9H6K1 298 aaPredicted RBP7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 DNAJC17Q9NVM6 304 aaKnown RBP7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 DNM3Q9UQ16 869 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 CLCA2Q9UQC9 943 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 STON1Q9Y6Q2 735 aa7.81□□□□□ -1.16
SPTLC1-205ENST00000477888 FLNCQ14315 2725 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 K7ENP7 123 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 KLK10O43240 276 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 SUV39H1O43463 412 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 GREM1O60565 184 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 ABL1P00519 1130 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 PIGRP01833 764 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 AFPP02771 609 aaKnown RBP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 OR52Z1P0C646 297 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 C7P10643 843 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 ACO1P21399 889 aaKnown RBP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 BDNFP23560 247 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 ACSL1P33121 698 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 LIG4P49917 911 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 FXR2P51116 673 aaKnown RBP eCLIP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 INSM1Q01101 510 aaPredicted RBP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 MYL7Q01449 175 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 TAF10Q12962 218 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 ORC1Q13415 861 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 STARD3Q14849 445 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 SV2CQ496J9 727 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 C4orf17Q53FE4 359 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 KIAA1614Q5VZ46 1190 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 DIEXFQ68CQ4 756 aaKnown RBP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 SCARA3Q6AZY7 606 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 SLC39A4Q6P5W5 647 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 INO80CQ6PI98 192 aaPredicted RBP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 ATG14Q6ZNE5 492 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 DIS3L2Q8IYB7 885 aaKnown RBP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 C4orf32Q8N8J7 132 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 SCFD1Q8WVM8 642 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 PRCCQ92733 491 aaPredicted RBP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 WBP2Q969T9 261 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 BIRC7Q96CA5 298 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 SIPA1Q96FS4 1042 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 BICD1Q96G01 975 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 ORAI3Q9BRQ5 295 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 MSTO1Q9BUK6 570 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 DPH1Q9BZG8 443 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 TRIM9Q9C026 710 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 BRMS1Q9HCU9 246 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 STARD5Q9NSY2 213 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 KCNK4Q9NYG8 393 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 EHD2Q9NZN4 543 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 ORC3Q9UBD5 711 aaPredicted RBP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 FBXO10Q9UK96 956 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 HEMK1Q9Y5R4 338 aaPredicted RBP7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 DENND4CQ5VZ89 1909 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 AHCTF1Q8WYP5 2266 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 DOPEY2Q9Y3R5 2298 aa7.8□□□□□ -1.16
SPTLC1-205ENST00000477888 MYO18AQ92614 2054 aaKnown RBP7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 CLEC18AA5D8T8 446 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 LAD1O00515 517 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 HNRNPDLO14979 420 aaKnown RBP7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 VILLO15195 856 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 COCHO43405 550 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 TSPAN3O60637 253 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 HUS1O60921 280 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 ATP2C2O75185 946 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 KRT38O76015 456 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 TYRP14679 529 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 CR2P20023 1033 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 LMO2P25791 158 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 CD27P26842 260 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 PNPLA4P41247 253 aa7.79□□□□□ -1.16
SPTLC1-205ENST00000477888 CCR10P46092 362 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms