RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SYPL2Q5VXT5 272 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 ACAD10Q6JQN1 1059 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 SCML4Q8N228 414 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 TTC16Q8NEE8 873 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 PDZD8Q8NEN9 1154 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 ADAMTS19Q8TE59 1207 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 SMARCD2Q92925 531 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 ACSF2Q96CM8 615 aaPredicted RBP16.65■□□□□ 0.26
COPS3-207ENST00000477299 C18orf8Q96DM3 657 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.65■□□□□ 0.26
COPS3-207ENST00000477299 CYLDQ9NQC7 956 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 PRKAG3Q9UGI9 489 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 NAALADL1Q9UQQ1 740 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 NR2E1Q9Y466 385 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 CEP83Q9Y592 693 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 NUMBLQ9Y6R0 609 aa16.65■□□□□ 0.26
COPS3-207ENST00000477299 ANHXE9PGG2 379 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 OLFM2O95897 454 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 LTFP02788 710 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 CKMP06732 381 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 TPM1P09493 284 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 PPP3CCP48454 512 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 RNASE9P60153 205 aaKnown RBP16.64■□□□□ 0.25
COPS3-207ENST00000477299 SLC6A3Q01959 620 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 EFEMP1Q12805 493 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 ASTE1Q2TB18 679 aaPredicted RBP16.64■□□□□ 0.25
COPS3-207ENST00000477299 BTBD8Q5XKL5 378 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 TRNP1Q6NT89 227 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 OLFML1Q6UWY5 402 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 TRIM72Q6ZMU5 477 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 MON1BQ7L1V2 547 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 ZDHHC14Q8IZN3 488 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 ZFRQ96KR1 1074 aaKnown RBP16.64■□□□□ 0.25
COPS3-207ENST00000477299 NOX5Q96PH1 765 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 ADAM33Q9BZ11 813 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 SYNCQ9H7C4 482 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 KCNK12Q9HB15 430 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 SFMBT1Q9UHJ3 866 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 COL4A3Q01955 1670 aa16.64■□□□□ 0.25
COPS3-207ENST00000477299 TICRRQ7Z2Z1 1910 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 TRAV19A0A0A6YYK7 116 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 ATMINO43313 823 aaPredicted RBP16.63■□□□□ 0.25
COPS3-207ENST00000477299 FBXO21O94952 628 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 MBL2P11226 248 aaPredicted RBP16.63■□□□□ 0.25
COPS3-207ENST00000477299 GFPT1Q06210 699 aaPredicted RBP16.63■□□□□ 0.25
COPS3-207ENST00000477299 GRM2Q14416 872 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 C10orf120Q5SQS8 335 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 VITQ6UXI7 678 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 PHF13Q86YI8 300 aaPredicted RBP16.63■□□□□ 0.25
COPS3-207ENST00000477299 CNGA4Q8IV77 575 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 MCOLN2Q8IZK6 566 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 ADAM32Q8TC27 787 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 IRGQQ8WZA9 623 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 FAM149B1Q96BN6 582 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 CLIC5Q9NZA1 410 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 ADAM22Q9P0K1 906 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 NENFQ9UMX5 172 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 CPQQ9Y646 472 aa16.63■□□□□ 0.25
COPS3-207ENST00000477299 HEPACAM2A8MVW5 462 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 NARSO43776 548 aaKnown RBP16.62■□□□□ 0.25
COPS3-207ENST00000477299 FTLP02792 175 aaPredicted RBP16.62■□□□□ 0.25
COPS3-207ENST00000477299 TFE3P19532 575 aaPredicted RBP16.62■□□□□ 0.25
COPS3-207ENST00000477299 DDX6P26196 483 aaKnown RBP eCLIP16.62■□□□□ 0.25
COPS3-207ENST00000477299 ATP5C1P36542 298 aaKnown RBP16.62■□□□□ 0.25
COPS3-207ENST00000477299 AVPR1AP37288 418 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 NSFP46459 744 aaKnown RBP16.62■□□□□ 0.25
COPS3-207ENST00000477299 GSE1Q14687 1217 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 RAB6CQ53S08 254 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 MIB1Q86YT6 1006 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 RNF135Q8IUD6 432 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 DEFB106AQ8N104 65 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 GJD3Q8N144 294 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 SLC44A3Q8N4M1 653 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 EMC1Q8N766 993 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 JOSD2Q8TAC2 188 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 ZFYVE19Q96K21 471 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 KLF16Q9BXK1 252 aaPredicted RBP16.62■□□□□ 0.25
COPS3-207ENST00000477299 RAB6CQ9H0N0 254 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 NHEJ1Q9H9Q4 299 aaPredicted RBP16.62■□□□□ 0.25
COPS3-207ENST00000477299 TRPV4Q9HBA0 871 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 ZFP14Q9HCL3 533 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 SPTLC3Q9NUV7 552 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 TDP1Q9NUW8 608 aa16.62■□□□□ 0.25
COPS3-207ENST00000477299 BZW2Q9Y6E2 419 aaKnown RBP16.62■□□□□ 0.25
COPS3-207ENST00000477299 ZFP37Q9Y6Q3 630 aaPredicted RBP16.62■□□□□ 0.25
COPS3-207ENST00000477299 TCRBV5S1A1TA0A578 114 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 LEFTY2O00292 366 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 ZNF263O14978 683 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 MSI1O43347 362 aaKnown RBP16.61■□□□□ 0.25
COPS3-207ENST00000477299 HMBSP08397 361 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 IRF1P10914 325 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 RALAP11233 206 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 NCAM1P13591 858 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 RRM1P23921 792 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 PSEN1P49768 467 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 YWHAZP63104 245 aaKnown RBP16.61■□□□□ 0.25
COPS3-207ENST00000477299 SLC7A9P82251 487 aa16.61■□□□□ 0.25
COPS3-207ENST00000477299 MAPK8IP2Q13387 824 aaPredicted RBP16.61■□□□□ 0.25
COPS3-207ENST00000477299 MTF1Q14872 753 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms