RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 POP4O95707 220 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 NPPAP01160 153 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 GYPCP04921 128 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 MUTP22033 750 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 TARSP26639 723 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 PSMA5P28066 241 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 GUCY1A2P33402 732 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SOX5P35711 763 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 IARSP41252 1262 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 HTR3AP46098 478 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SLC26A2P50443 739 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 GTF2A2P52657 109 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 NKX2-5P52952 324 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 COPB1P53618 953 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 YARSP54577 528 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 WDR4P57081 412 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 HERVK_113P62684 666 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CDR2Q01850 454 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SELENBP1Q13228 472 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 MOGSQ13724 837 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CBX2Q14781 532 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 RRS1Q15050 365 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 PKN2Q16513 984 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 C5orf22Q49AR2 442 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CFAP221Q4G0U5 840 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 FAM209BQ5JX69 171 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 GPATCH4Q5T3I0 446 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 PXDC1Q5TGL8 231 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 NANOGP8Q6NSW7 305 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 AAGABQ6PD74 315 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 RTL10Q7L3V2 364 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 EPM2AIP1Q7L775 607 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 ECHDC2Q86YB7 292 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PDSS2Q86YH6 399 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 FBXL6Q8N531 539 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 METTL25Q8N6Q8 603 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 KCNH5Q8NCM2 988 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 OR6Y1Q8NGX8 325 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 GOT1L1Q8NHS2 421 aaPredicted RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 TEX47Q8TBZ9 253 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CHAC2Q8WUX2 184 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SLC44A1Q8WWI5 657 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 MTMR8Q96EF0 704 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 TOE1Q96GM8 510 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 FAM167AQ96KS9 214 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 YME1L1Q96TA2 773 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 EYA1Q99502 592 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 MNTQ99583 582 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PIP5K1AQ99755 562 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 HERPUD2Q9BSE4 406 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 AP1M1Q9BXS5 423 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SAP130Q9H0E3 1048 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 VPS11Q9H270 941 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ADAM7Q9H2U9 754 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 PABPC3Q9H361 631 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 MMRN2Q9H8L6 949 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SMYD2Q9NRG4 433 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 SACM1LQ9NTJ5 587 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 RBM12Q9NTZ6 932 aaKnown RBP4.3□□□□□ -1.72
CD55-208ENST00000476590 FGFR1OP2Q9NVK5 253 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ASNSD1Q9NWL6 643 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 NDE1Q9NXR1 346 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 DTLQ9NZJ0 730 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 TRPM5Q9NZQ8 1165 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 EPS15L1Q9UBC2 864 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 ERGIC3Q9Y282 383 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 TRAPPC8Q9Y2L5 1435 aa4.3□□□□□ -1.72
CD55-208ENST00000476590 CPDO75976 1380 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 NCANO14594 1321 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ATP7BP35670 1465 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 CYP2D7A0A087X1C5 515 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 C15orf38-AP3S2A0A0A6YYH1 394 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 GRID2IPA4D2P6 1211 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 SH3D21A4FU49 640 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TRPC5OSA6NMA1 111 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TCP11X1B4DZS4 312 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 F8W8V4 182 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 VWA5AO00534 786 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PRRG2O14669 202 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TNPO2O14787 897 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 MAPK13O15264 365 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MTSS1O43312 755 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 RANBP6O60518 1105 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 PDE8AO60658 829 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TNFRSF21O75509 655 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 USP1O94782 785 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MYO1DO94832 1006 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 GAS8O95995 478 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 AGTP01019 485 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 CD4P01730 458 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ANPEPP15144 967 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 HPGDP15428 266 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 NPR3P17342 541 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PLCG1P19174 1290 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MARCKSP29966 332 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 RRM2P31350 389 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 CYLC1P35663 651 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 IREB2P48200 963 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 HCAR3P49019 387 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 SLC5A3P53794 718 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms