RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 TMEM60Q9H2L4 133 aa4.44□□□□□ -1.7
GPCPD1-204ENST00000473797 STK32BQ9NY57 414 aa4.44□□□□□ -1.7
GPCPD1-204ENST00000473797 NKX1-2Q9UD57 310 aaPredicted RBP4.44□□□□□ -1.7
GPCPD1-204ENST00000473797 NOP58Q9Y2X3 529 aaKnown RBP4.44□□□□□ -1.7
GPCPD1-204ENST00000473797 SPATA31A1Q5TZJ5 1347 aa4.44□□□□□ -1.7
GPCPD1-204ENST00000473797 SHROOM4Q9ULL8 1493 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 AGPSO00116 658 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 AKAP10O43572 662 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 RGS10O43665 173 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 RASAL1O95294 804 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 SLC7A1P30825 629 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 HTR6P50406 440 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 SLC14A1Q13336 389 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 MTX1Q13505 466 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 ARHGEF7Q14155 803 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 SEMA3AQ14563 771 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 MFSD13AQ14CX5 517 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 TTF1Q15361 905 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 EARS2Q5JPH6 523 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 SWSAP1Q6NVH7 229 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 COL23A1Q86Y22 540 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 MMP21Q8N119 569 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 BCAS4Q8TDM0 211 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 P2RY11Q96G91 374 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 ZNF668Q96K58 619 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 FAM83DQ9H4H8 585 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 ZBTB40Q9NUA8 1239 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 DKK4Q9UBT3 224 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 ZNF180Q9UJW8 692 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 USP19O94966 1318 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 NOTCH4Q99466 2003 aa4.43□□□□□ -1.7
GPCPD1-204ENST00000473797 B4DGG1 531 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 H3BNX3 289 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 H7C4K7 107 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 MARCH6O60337 910 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 PARP1P09874 1014 aaKnown RBP4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 CYP19A1P11511 503 aaPredicted RBP4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 TNFRSF1BP20333 461 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 PTDSS1P48651 473 aaKnown RBP4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 PGDP52209 483 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 GPC5P78333 572 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 B4GALNT1Q00973 533 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 DEUP1Q05D60 604 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 STIM1Q13586 685 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 ST3GAL2Q16842 350 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 FAM110CQ1W6H9 321 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 CACHD1Q5VU97 1274 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 LVRNQ6Q4G3 990 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 DLK2Q6UY11 383 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 TPH2Q8IWU9 490 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 PELI3Q8N2H9 469 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 ZBTB34Q8NCN2 500 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 ZDHHC12Q96GR4 267 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 B3GNT5Q9BYG0 378 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 FAM234AQ9H0X4 552 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 CDH19Q9H159 772 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 SEMA4BQ9NPR2 832 aaPredicted RBP4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 ASAP1Q9ULH1 1129 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 RIMKLBQ9ULI2 386 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 CAPN11Q9UMQ6 739 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 L1RE1Q9UN81 338 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 SQORQ9Y6N5 450 aa4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 TTBK1Q5TCY1 1321 aaPredicted RBP4.42□□□□□ -1.7
GPCPD1-204ENST00000473797 CAPN8A6NHC0 703 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 HGFP14210 728 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 ADRA1DP25100 572 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 TACR3P29371 465 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 SUMO3P55854 103 aaPredicted RBP4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 YPEL5P62699 121 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 CLCA4Q14CN2 919 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 UBAP2Q5T6F2 1119 aaKnown RBP4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 COLCA1Q6ZS62 124 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 USP49Q70CQ1 688 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 C16orf71Q8IYS4 520 aaPredicted RBP4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 METTL25Q8N6Q8 603 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 SMRP1Q8NCR6 262 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 RUNDC1Q96C34 613 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 GPATCH3Q96I76 525 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 TMEM8AQ9HCN3 771 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 CPNE7Q9UBL6 633 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 STEAP1Q9UHE8 339 aa4.41□□□□□ -1.7
GPCPD1-204ENST00000473797 AQP7P3A6NL99 342 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 FYB1O15117 783 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 PIAS2O75928 621 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 IBSPP21815 317 aaPredicted RBP4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 CPT1AP50416 773 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 RAB27AP51159 221 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 SLC29A2Q14542 456 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 PFKFB3Q16875 520 aaPredicted RBP4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 ACRBPQ8NEB7 543 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 HIPK2Q9H2X6 1198 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 VPS51Q9UID3 782 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 COL15A1P39059 1388 aa4.4□□□□□ -1.71
GPCPD1-204ENST00000473797 FAM227AF5H4B4 570 aa4.39□□□□□ -1.71
GPCPD1-204ENST00000473797 FOXN3O00409 490 aaPredicted RBP4.39□□□□□ -1.71
GPCPD1-204ENST00000473797 TLX3O43711 291 aaPredicted RBP4.39□□□□□ -1.71
GPCPD1-204ENST00000473797 CTNND1O60716 968 aaKnown RBP4.39□□□□□ -1.71
GPCPD1-204ENST00000473797 CD63P08962 238 aa4.39□□□□□ -1.71
GPCPD1-204ENST00000473797 TXNP10599 105 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms