RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 EBF1Q9UH73 591 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 FARP1Q9Y4F1 1045 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 ANKRD34BA5PLL1 514 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 RGS13O14921 159 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 KMOO15229 486 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 MED24O75448 989 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 RSL1D1O76021 490 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 PROSCO94903 275 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 SGPL1O95470 568 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 ITGAVP06756 1048 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 MCF2P10911 925 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 RPA1P27694 616 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 MXI1P50539 228 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 OXA1LQ15070 435 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 PDK1Q15118 436 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 Q3C1V9 767 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 EPC2Q52LR7 807 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 FSCBQ5H9T9 825 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 AGAP7PQ5VUJ5 663 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 KRT39Q6A163 491 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 SCARA3Q6AZY7 606 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 MOXD1Q6UVY6 613 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 C16orf89Q6UX73 402 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 NSMFQ6X4W1 530 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 ANKMY2Q8IV38 441 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 NUDCD3Q8IVD9 361 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 MMAAQ8IVH4 418 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 TPH2Q8IWU9 490 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 NKD2Q969F2 451 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 EHD1Q9H4M9 534 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 XAB2Q9HCS7 855 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 SNCAIPQ9Y6H5 919 aa9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-207ENST00000469334 PHLPP1O60346 1717 aa9.34□□□□□ -0.92
SMARCE1-207ENST00000469334 CENPBD1B2RD01 187 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 GIPC1O14908 333 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 NOL3O60936 208 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 FARP2O94887 1054 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 TRIM49P0CI25 452 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 TRIM49CP0CI26 452 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 ENDOUP21128 410 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 SSTR1P30872 391 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 PTPN7P35236 360 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 FLOT2Q14254 428 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 LLGL1Q15334 1064 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 LGSNQ5TDP6 509 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 ANGEL2Q5VTE6 544 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 TTC23LQ6PF05 361 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 DENND5BQ6ZUT9 1274 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 TTC30AQ86WT1 665 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 ARHGEF19Q8IW93 802 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 PALM2Q8IXS6 379 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 PIWIL2Q8TC59 973 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 KBTBD7Q8WVZ9 684 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 NACC2Q96BF6 587 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 NSUN4Q96CB9 384 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 CLIP3Q96DZ5 547 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 DCUN1D5Q9BTE7 237 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 HEMGNQ9BXL5 484 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 ANKRD60Q9BZ19 345 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 PARVGQ9HBI0 331 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 CYP4F11Q9HBI6 524 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 RIC8BQ9NVN3 520 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 CHORDC1Q9UHD1 332 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 SATB2Q9UPW6 733 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 TANC1Q9C0D5 1861 aa9.33□□□□□ -0.92
SMARCE1-207ENST00000469334 EMSYQ7Z589 1322 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 H3BMQ9 156 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 AREL1O15033 823 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 KRT37O76014 449 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 APOEP02649 317 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 NMT1P30419 496 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 IREB2P48200 963 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 BMXP51813 675 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 MFAP3P55082 362 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 EVX2Q03828 476 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 E2F2Q14209 437 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 LSM12Q3MHD2 195 aaKnown RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 FAM209AQ5JX71 171 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 POTEGQ6S5H5 508 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 ISLR2Q6UXK2 745 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 RCOR2Q8IZ40 523 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF444Q8N0Y2 327 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 GALNT4Q8N4A0 578 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 FIBCD1Q8N539 461 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 FBXO36Q8NEA4 188 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 NEDD1Q8NHV4 660 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 CALML6Q8TD86 181 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF384Q8TF68 577 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 SHC3Q92529 594 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 COG8Q96MW5 612 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 MBOAT7Q96N66 472 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 ADAM33Q9BZ11 813 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 FRMD8P1Q9BZ68 369 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 GLT8D2Q9H1C3 349 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 CAAP1Q9H8G2 361 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 IFT122Q9HBG6 1241 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 PNPLA8Q9NP80 782 aa9.32□□□□□ -0.92
SMARCE1-207ENST00000469334 OLAHQ9NV23 265 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms