RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 CHD5Q8TDI0 1954 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 ZDBF2Q9HCK1 2354 aa3.71□□□□□ -1.81
TRIM59-202ENST00000468542 FRYLO94915 3013 aa3.71□□□□□ -1.81
TRIM59-202ENST00000468542 KMT2EQ8IZD2 1858 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ZNF840PA6NDX5 716 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SLC38A8A6NNN8 435 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 HHLA1C9JL84 531 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 FOXN3O00409 490 aaPredicted RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 PES1O00541 588 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 CCL16O15467 120 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 HCRTO43612 131 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ECI2O75521 394 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 AP1G2O75843 785 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GFPT2O94808 682 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 FBXO21O94952 628 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 F11P03951 625 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GLI1P08151 1106 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SPATA31D3P0C874 917 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 LAMP2P13473 410 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 CCDC130P13994 396 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 CYP11B1P15538 503 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 FERP16591 822 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 BDNFP23560 247 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 YWHAQP27348 245 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GNA15P30679 374 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SOX5P35711 763 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GRIK1P39086 918 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 PRKCIP41743 596 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 STAT1P42224 750 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 PTGIRP43119 386 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GPD2P43304 727 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 RNF144AP50876 292 aaPredicted RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 KCNQ1P51787 676 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 KIF11P52732 1056 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SLC5A3P53794 718 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 MLLT6P55198 1093 aaPredicted RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GSCP56915 257 aaPredicted RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 POLR2FP61218 127 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ZBED6P86452 979 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 FANCCQ00597 558 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TFF2Q03403 129 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 FCHO2Q0JRZ9 810 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 LRMPQ12912 555 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 MTA1Q13330 715 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GAS6Q14393 721 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ZNF268Q14587 947 aaPredicted RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 DRAP1Q14919 205 aaPredicted RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TAF12Q16514 161 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 DDR2Q16832 855 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SLC5A9Q2M3M2 681 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ARHGAP15Q53QZ3 475 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 HSP90AA4PQ58FG1 418 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 RARS2Q5T160 578 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SPECC1LQ69YQ0 1117 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 PM20D1Q6GTS8 502 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 C1orf228Q6PIY5 440 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 EP400NLQ6ZTU2 488 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SPATA31D4Q6ZUB0 917 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GAREM2Q75VX8 874 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 MTSS1LQ765P7 747 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 RRAGAQ7L523 313 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ARCQ7LC44 396 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GRASPQ7Z6J2 395 aaPredicted RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TMEM150AQ86TG1 271 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TMEM110Q86TL2 294 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 PIGZQ86VD9 579 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TTC30AQ86WT1 665 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 DDX42Q86XP3 938 aaKnown RBP eCLIP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 CREBRFQ8IUR6 639 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GLYCTKQ8IVS8 523 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 GJD3Q8N144 294 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 NUP93Q8N1F7 819 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SVOPQ8N4V2 548 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TTC9BQ8N6N2 239 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 C12orf29Q8N999 325 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 C1orf131Q8NDD1 294 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 STKLD1Q8NE28 680 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ZMIZ2Q8NF64 920 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ZNF397Q8NF99 534 aaPredicted RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 RNF217Q8TC41 542 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 LRRN4Q8WUT4 740 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 DEPDC1BQ8WUY9 529 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ZNF606Q8WXB4 792 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 PPM1EQ8WY54 764 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TFAP2BQ92481 460 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 DDX1Q92499 740 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 MRPS31Q92665 395 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 FGF13Q92913 245 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SMARCD2Q92925 531 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 KAT5Q92993 513 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 MRFAP1L1Q96HT8 127 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ASB16Q96NS5 453 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 DNAJC7Q99615 494 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 SMOQ99835 787 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 ZSWIM1Q9BR11 485 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 CORO1BQ9BR76 489 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 LSM14BQ9BX40 385 aaKnown RBP3.71□□□□□ -1.82
TRIM59-202ENST00000468542 VPS16Q9H269 839 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 POMKQ9H5K3 350 aa3.71□□□□□ -1.82
TRIM59-202ENST00000468542 TASP1Q9H6P5 420 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms