RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	FAM149B1	Q96BN6	582 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	FAF2	Q96CS3	445 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	CFAP57	Q96MR6	1250 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	ZNF670	Q9BS34	389 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	TTLL2	Q9BWV7	592 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	FAM129A	Q9BZQ8	928 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	NGRN	Q9NPE2	291 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	ABCC13	Q9NSE7	274 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	ABI2	Q9NYB9	513 aa	Predicted RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	CLIC5	Q9NZA1	410 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	SLC4A7	Q9Y6M7	1214 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	LRRD1	A4D1F6	860 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	YJEFN3	A6XGL0	299 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	NT5C1B-RDH14	C9J2C7	533 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134		E7ENQ6	273 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	PIK3R2	O00459	728 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	ZNF189	O75820	626 aa	Predicted RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	OR4Q2	P0C623	313 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	RARA	P10276	462 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	RALA	P11233	206 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	KDELR1	P24390	212 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	HTR7	P34969	479 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	NDUFV1	P49821	464 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	SULT1E1	P49888	294 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	DRG2	P55039	364 aa	Known RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	RNASE9	P60153	205 aa	Known RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	ROR1	Q01973	937 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	LMNB2	Q03252	620 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	KRT17	Q04695	432 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	UBE3A	Q05086	875 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	NNT	Q13423	1086 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	TFDP2	Q14188	446 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	OTUD1	Q5VV17	481 aa	Predicted RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	BSPRY	Q5W0U4	402 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	MFSD7	Q6UXD7	560 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	RTL10	Q7L3V2	364 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	OTOP2	Q7RTS6	562 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	CCDC50	Q8IVM0	306 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	PDZD8	Q8NEN9	1154 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	ZNF461	Q8TAF7	563 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	GRK7	Q8WTQ7	553 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	PEBP4	Q96S96	227 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	RHOBTB2	Q9BYZ6	727 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	SMOC2	Q9H3U7	446 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	SMARCAL1	Q9NZC9	954 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	STIM2	Q9P246	746 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	IRAK3	Q9Y616	596 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	CDY1	Q9Y6F8	540 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	GBF1	Q92538	1859 aa		11.48	□□□□□ -0.57
MUC1-216	ENST00000467134	ZBBX	A8MT70	800 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	CAPN9	O14815	690 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	LILRB3	O75022	631 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	ERLIN1	O75477	346 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	GRAP2	O75791	330 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	VNN2	O95498	520 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	USP17L7	P0C7H9	530 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	CTSA	P10619	480 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	ATF2	P15336	505 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	TCF4	P15884	667 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	PBX3	P40426	434 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	CXCR3	P49682	368 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	EPHB4	P54760	987 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	YWHAG	P61981	247 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	ATP11A	P98196	1134 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	CUL1	Q13616	776 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	DCAF6	Q58WW2	860 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	BRMS1L	Q5PSV4	323 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	ERMARD	Q5T6L9	678 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	DAB2IP	Q5VWQ8	1189 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	TXNRD3NB	Q6F5E7	133 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	RNF19B	Q6ZMZ0	732 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	DENND5B	Q6ZUT9	1274 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	TAS1R1	Q7RTX1	841 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	SCN4B	Q8IWT1	228 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	IFT20	Q8IY31	132 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	RAPGEF5	Q92565	580 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	TSC1	Q92574	1164 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	NKD2	Q969F2	451 aa	Predicted RBP	11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	SAMD11	Q96NU1	681 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	KRT12	Q99456	494 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	CLSTN3	Q9BQT9	956 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	SNRNP25	Q9BV90	132 aa	Known RBP	11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	AP1M1	Q9BXS5	423 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	PARD6B	Q9BYG5	372 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	RAB17	Q9H0T7	212 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	ZBP1	Q9H171	429 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	MRPL17	Q9NRX2	175 aa	Known RBP	11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	OLA1	Q9NTK5	396 aa	Known RBP	11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	RASAL2	Q9UJF2	1139 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	DENND4C	Q5VZ89	1909 aa		11.47	□□□□□ -0.57
MUC1-216	ENST00000467134	OBSL1	O75147	1896 aa		11.46	□□□□□ -0.57
MUC1-216	ENST00000467134	WDR27	A2RRH5	827 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms