RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PCDH18Q9HCL0 1135 aa19.04■□□□□ 0.64
COL9A3-205ENST00000466192 F8W810 466 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 ARVCFO00192 962 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 MDM4O15151 490 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 INPPL1O15357 1258 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 GDF10P55107 478 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 MRPS5P82675 430 aaKnown RBP19.03■□□□□ 0.64
COL9A3-205ENST00000466192 LONRF1Q17RB8 773 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 NPNTQ6UXI9 565 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 NLRC5Q86WI3 1866 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 MAP7D3Q8IWC1 876 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 DEFB106AQ8N104 65 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 RBM15Q96T37 977 aaKnown RBP eCLIP19.03■□□□□ 0.64
COL9A3-205ENST00000466192 KCNK16Q96T55 309 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 MAK16Q9BXY0 300 aaKnown RBP19.03■□□□□ 0.64
COL9A3-205ENST00000466192 LRRC4Q9HBW1 653 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 PHF24Q9UPV7 400 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 B4GALT3O60512 393 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 AP1G2O75843 785 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 MATKP42679 507 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 IFI35P80217 286 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-205ENST00000466192 SLC24A5Q71RS6 500 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 ZMIZ2Q8NF64 920 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 SH3TC2Q8TF17 1288 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 FAM149B1Q96BN6 582 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 TMEM109Q9BVC6 243 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 PCDH9Q9HC56 1237 aa19.03■□□□□ 0.64
COL9A3-205ENST00000466192 CWC15Q9P013 229 aaKnown RBP19.03■□□□□ 0.64
COL9A3-205ENST00000466192 M0QZQ0 153 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 CYP11A1P05108 521 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 PCSK1P29120 753 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 TKTL1P51854 596 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 ERMARDQ5T6L9 678 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 ZCCHC9Q8N567 271 aaKnown RBP19.02■□□□□ 0.64
COL9A3-205ENST00000466192 SPATA18Q8TC71 538 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 RSPH1Q8WYR4 309 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 C9orf72Q96LT7 481 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 UROC1Q96N76 676 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 MAGEB5Q9BZ81 275 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 NINJ2Q9NZG7 142 aa19.02■□□□□ 0.64
COL9A3-205ENST00000466192 TPX2Q9ULW0 747 aaKnown RBP19.02■□□□□ 0.64
COL9A3-205ENST00000466192 TET1Q8NFU7 2136 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 EOMESO95936 686 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 YY1P25490 414 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 EIF3EP60228 445 aaKnown RBP19.02■□□□□ 0.63
COL9A3-205ENST00000466192 YWHAZP63104 245 aaKnown RBP19.02■□□□□ 0.63
COL9A3-205ENST00000466192 TFDP2Q14188 446 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 ARHGEF6Q15052 776 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 ANKRD20A8PQ5CZ79 823 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 CLLU1OSQ5K130 101 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 GPRIN1Q7Z2K8 1008 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 CROCCP2Q86T23 111 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 SIX6OS1Q8N1H7 587 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 PQLC3Q8N755 202 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 RHOBTB2Q9BYZ6 727 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.02■□□□□ 0.634e-7■□□□□ 8.1
COL9A3-205ENST00000466192 RSPH14Q9UHP6 348 aa19.02■□□□□ 0.63
COL9A3-205ENST00000466192 DAB1O75553 588 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 PRMT2P55345 433 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 PITX1P78337 314 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-205ENST00000466192 FAM189BP81408 668 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 AUHQ13825 339 aaKnown RBP19.01■□□□□ 0.63
COL9A3-205ENST00000466192 NOMO1Q15155 1222 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 SLC25A52Q3SY17 297 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 DCAF6Q58WW2 860 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 PPP6R3Q5H9R7 873 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-205ENST00000466192 OTUD1Q5VV17 481 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-205ENST00000466192 HFE2Q6ZVN8 426 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 STRADAQ7RTN6 431 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 ZNF280BQ86YH2 543 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 UNC45BQ8IWX7 931 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 CCDC185Q8N715 623 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 PCDH19Q8TAB3 1148 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 MYLPFQ96A32 169 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 ACBD6Q9BR61 282 aa19.01■□□□□ 0.63
COL9A3-205ENST00000466192 KBTBD13C9JR72 458 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 NRP1O14786 923 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 MCF2LO15068 1137 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 RBP3P10745 1247 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 L1CAMP32004 1257 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 SULT1E1P49888 294 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 SEC24CP53992 1094 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 DPYSL2Q16555 572 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 FAM171BQ6P995 826 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 DCLRE1AQ6PJP8 1040 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 GLB1LQ6UWU2 654 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 METTL23Q86XA0 190 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 PLD5Q8N7P1 536 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 MDM1Q8TC05 714 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 TRAF3IP1Q8TDR0 691 aaPredicted RBP19■□□□□ 0.63
COL9A3-205ENST00000466192 RSAD2Q8WXG1 361 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 P3H4Q92791 437 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 ULBP1Q9BZM6 244 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 ROPN1BQ9BZX4 212 aaPredicted RBP19■□□□□ 0.63
COL9A3-205ENST00000466192 ROPN1Q9HAT0 212 aaPredicted RBP19■□□□□ 0.63
COL9A3-205ENST00000466192 PPANQ9NQ55 473 aaKnown RBP19■□□□□ 0.63
COL9A3-205ENST00000466192 TRIM17Q9Y577 477 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 DDHD2O94830 711 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 AGTP01019 485 aa19■□□□□ 0.63
COL9A3-205ENST00000466192 CDK7P50613 346 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms