RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 YPEL5P62699 121 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 TXNL4AP83876 142 aaKnown RBP2.74□□□□□ -1.97
CCDC93-205ENST00000466171 AMPD3Q01432 767 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 SLC14A1Q13336 389 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 USP43Q70EL4 1123 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 DAAM2Q86T65 1068 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 PELI3Q8N2H9 469 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 BCAS4Q8TDM0 211 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 JPH3Q8WXH2 748 aaPredicted RBP2.74□□□□□ -1.97
CCDC93-205ENST00000466171 HPS3Q969F9 1004 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 TRIM54Q9BYV2 358 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 TRIM5Q9C035 493 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 TMEM8AQ9HCN3 771 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 XPNPEP3Q9NQH7 507 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 ZBTB40Q9NUA8 1239 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 TMEM45AQ9NWC5 275 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 STAP2Q9UGK3 403 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 NOP58Q9Y2X3 529 aaKnown RBP2.74□□□□□ -1.97
CCDC93-205ENST00000466171 CDY1Q9Y6F8 540 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 NOTCH4Q99466 2003 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 F8W810 466 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 EXOC5O00471 708 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 FYB1O15117 783 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 CD3EAPO15446 510 aaKnown RBP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 CTIFO43310 598 aaKnown RBP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 AKAP10O43572 662 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 SPRY2O43597 315 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 SLC28A2O43868 658 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 NGFRP08138 427 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 CT47B1P0C2W7 299 aaPredicted RBP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 TBXAS1P24557 533 aaPredicted RBP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 ADRA1DP25100 572 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 ARFIP2P53365 341 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 TIAL1Q01085 375 aaKnown RBP eCLIP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 ST3GAL2Q16842 350 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 EARS2Q5JPH6 523 aaKnown RBP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 ATAT1Q5SQI0 421 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 IFIT1BQ5T764 474 aaKnown RBP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 FAM57BQ71RH2 274 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 PNPLA1Q8N8W4 532 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 FAM71DQ8N9W8 422 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 PLBD2Q8NHP8 589 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 SPSB4Q96A44 273 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 CHMP4CQ96CF2 233 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 ZNF668Q96K58 619 aaPredicted RBP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 NTPCRQ9BSD7 190 aaKnown RBP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 TUBB6Q9BUF5 446 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 SCNM1Q9BWG6 230 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 ASPSCR1Q9BZE9 553 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 ZNF518BQ9C0D4 1074 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 NUAK2Q9H093 628 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 ZCWPW1Q9H0M4 648 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 USP29Q9HBJ7 922 aa2.73□□□□□ -1.97
CCDC93-205ENST00000466171 A1CFQ9NQ94 594 aaKnown RBP2.73□□□□□ -1.97
CCDC93-205ENST00000466171 LOC102723971A0A1B0GUV8 181 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 C2CD4BA6NLJ0 364 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 A8MVJ9 347 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 ERVV-2B6SEH9 535 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 PHGDHO43175 533 aaKnown RBP2.72□□□□□ -1.97
CCDC93-205ENST00000466171 CCP110O43303 1012 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 RASSF9O75901 435 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 PLAUP00749 431 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 ATF7P17544 494 aaPredicted RBP2.72□□□□□ -1.97
CCDC93-205ENST00000466171 GATMP50440 423 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 PGDP52209 483 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 KPNB1Q14974 876 aaKnown RBP2.72□□□□□ -1.97
CCDC93-205ENST00000466171 CAPRIN2Q6IMN6 1127 aaKnown RBP2.72□□□□□ -1.97
CCDC93-205ENST00000466171 TRAPPC11Q7Z392 1133 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 DENND1CQ8IV53 801 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 FBXL14Q8N1E6 418 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 SLC44A5Q8NCS7 719 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 B4GALNT2Q8NHY0 566 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 ATP2A3Q93084 1043 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 EDC3Q96F86 508 aaKnown RBP2.72□□□□□ -1.97
CCDC93-205ENST00000466171 TRMT61AQ96FX7 289 aaKnown RBP2.72□□□□□ -1.97
CCDC93-205ENST00000466171 SUCLG2Q96I99 432 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 ZNF479Q96JC4 524 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 CINPQ9BW66 212 aaPredicted RBP2.72□□□□□ -1.97
CCDC93-205ENST00000466171 DPH1Q9BZG8 443 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.72□□□□□ -1.97
CCDC93-205ENST00000466171 STEAP1Q9UHE8 339 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 FZD4Q9ULV1 537 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 ANKRD6Q9Y2G4 727 aa2.72□□□□□ -1.97
CCDC93-205ENST00000466171 TTBK1Q5TCY1 1321 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 MBD3L4A6NDZ8 208 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 MBD3L3A6NE82 208 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 ACOT8O14734 319 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 SNX2O60749 519 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 PIAS2O75928 621 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 NDUFB8O95169 186 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 KITP10721 976 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 NPR1P16066 1061 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 HTR1BP28222 390 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 JAK3P52333 1124 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 PPATQ06203 517 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 CCDC15Q0P6D6 951 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 RFX8Q6ZV50 586 aa2.71□□□□□ -1.98
CCDC93-205ENST00000466171 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 FOXP4Q8IVH2 680 aaPredicted RBP2.71□□□□□ -1.98
CCDC93-205ENST00000466171 UEVLDQ8IX04 471 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms