RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ARHGEF3Q9NR81 526 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 DKK3Q9UBP4 350 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 NFU1Q9UMS0 254 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 MYRFQ9Y2G1 1151 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 CCDC189A1A4V9 331 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 VWC2LB2RUY7 222 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 PMPCBO75439 489 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 TTLL1O95922 423 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 LMNAP02545 664 aaKnown RBP4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 ERBB2P04626 1255 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 NR2F6P10588 404 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 NDUFB7P17568 137 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 DRD1P21728 446 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 GSTM5P46439 218 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 DGKQP52824 942 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 ARL4CP56559 192 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 ACOX1Q15067 660 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 P3H1Q32P28 736 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 ADCK5Q3MIX3 580 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 Q6YL49 198 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 RINLQ6ZS11 566 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 USP51Q70EK9 711 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 RAB11FIP2Q7L804 512 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 WDR53Q7Z5U6 358 aaPredicted RBP4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 P3H2Q8IVL5 708 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 METTL25Q8N6Q8 603 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 SIRT6Q8N6T7 355 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 RP9Q8TA86 221 aaKnown RBP4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 OTUD7AQ8TE49 926 aaPredicted RBP4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 SLC9A6Q92581 669 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 RFKQ969G6 155 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 TBC1D20Q96BZ9 403 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 FAM167BQ9BTA0 163 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 ZNF747Q9BV97 191 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 SAYSD1Q9NPB0 183 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 GABRQQ9UN88 632 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 SCAF8Q9UPN6 1271 aaKnown RBP4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 GPR52Q9Y2T5 361 aa4.25□□□□□ -1.73
HMGXB4-205ENST00000464480 NPIPB8E9PQR5 432 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 IPO5O00410 1097 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 CES2O00748 559 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 NARSO43776 548 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 TMPRSS11DO60235 418 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 TJP3O95049 919 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 ESRRBO95718 433 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 NPSP0C0P6 89 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 GYS1P13807 737 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 GRIA3P42263 894 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 ABHD18Q0P651 414 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 GRM4Q14833 912 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 TMEM196Q5HYL7 178 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 JMJD6Q6NYC1 403 aaPredicted RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 ANKRD16Q6P6B7 361 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 MTHFD1LQ6UB35 978 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 DPY19L3Q6ZPD9 716 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 PARS2Q7L3T8 475 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 PEG10Q86TG7 708 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 SLC44A2Q8IWA5 706 aaPredicted RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 CLASRPQ8N2M8 674 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 PRR25Q96S07 402 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 PABPC3Q9H361 631 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 SEPSECSQ9HD40 501 aaKnown RBP4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 FSCN3Q9NQT6 498 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 PRDM8Q9NQV8 689 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 SNX15Q9NRS6 342 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 SYBUQ9NX95 663 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 LPAR3Q9UBY5 353 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 GTF2A1LQ9UNN4 478 aa4.24□□□□□ -1.73
HMGXB4-205ENST00000464480 TMEM191CA6NGB0 347 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 HMX3A6NHT5 357 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 GCOM1H8Y6P7 765 aaPredicted RBP4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 QSOX1O00391 747 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 DHHO43323 396 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 CBFA2T3O75081 653 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 TAF5LO75529 589 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 FGAP02671 866 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 EBLN1P0CF75 366 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 INSRRP14616 1297 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 CREB1P16220 341 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 ADRA1DP25100 572 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 KLRK1P26718 216 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 CST5P28325 142 aaPredicted RBP4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 PCSK6P29122 969 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 CTGFP29279 349 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 PBX1P40424 430 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 SEC24CP53992 1094 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 TXNL4AP83876 142 aaKnown RBP4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 E2F1Q01094 437 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 MTAPQ13126 283 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 FHL3Q13643 280 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 CYP1B1Q16678 543 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 BTBD16Q32M84 506 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 TRIM60Q495X7 471 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 ANKRD45Q5TZF3 282 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 NFRKBQ6P4R8 1299 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 PTCHD4Q6ZW05 846 aa4.23□□□□□ -1.73
HMGXB4-205ENST00000464480 Q6ZWC4 215 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms