RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 AP4E1Q9UPM8 1137 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 TCRBV7S3A2A0A539 114 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 CFAP69A5D8W1 941 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 C5orf60A6NFR6 353 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 BEST1O76090 585 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 CYP2F1P24903 491 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 GCAP28676 217 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 CCND3P30281 292 aaPredicted RBP21.05■□□□□ 0.96
CCM2-203ENST00000461377 NRLP54845 237 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 HP1BP3Q5SSJ5 553 aaPredicted RBP21.05■□□□□ 0.96
CCM2-203ENST00000461377 FNBP1LQ5T0N5 605 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 VSTM1Q6UX27 236 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 CLEC20AQ6ZU45 233 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 TDRPQ86YL5 185 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 FAM107BQ9H098 131 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 CCDC134Q9H6E4 229 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 NRDE2Q9H7Z3 1164 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 CRTAC1Q9NQ79 661 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 MTMR10Q9NXD2 777 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 ZMYND8Q9ULU4 1186 aaPredicted RBP21.05■□□□□ 0.96
CCM2-203ENST00000461377 EXOC1LA0A1B0GW35 172 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 BCLAF3A2AJT9 711 aaKnown RBP21.05■□□□□ 0.96
CCM2-203ENST00000461377 CST5P28325 142 aaPredicted RBP21.05■□□□□ 0.96
CCM2-203ENST00000461377 THPOP40225 353 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 LHX1P48742 406 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 SCNN1GP51170 649 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 MRPS5P82675 430 aaKnown RBP21.05■□□□□ 0.96
CCM2-203ENST00000461377 CAP1Q01518 475 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 PPP6R3Q5H9R7 873 aaPredicted RBP21.05■□□□□ 0.96
CCM2-203ENST00000461377 DEFB106AQ8N104 65 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 C3orf58Q8NDZ4 430 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 KCTD15Q96SI1 283 aaPredicted RBP21.05■□□□□ 0.96
CCM2-203ENST00000461377 DHX35Q9H5Z1 703 aaKnown RBP21.05■□□□□ 0.96
CCM2-203ENST00000461377 VPS37BQ9H9H4 285 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 PADI3Q9ULW8 664 aa21.05■□□□□ 0.96
CCM2-203ENST00000461377 ZNF623O75123 536 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 BANF1O75531 89 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 CREB1P16220 341 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 CD52P31358 61 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 RPL9P32969 192 aaKnown RBP21.04■□□□□ 0.96
CCM2-203ENST00000461377 BASP1P80723 227 aaKnown RBP21.04■□□□□ 0.96
CCM2-203ENST00000461377 SLC25A52Q3SY17 297 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 MSS51Q4VC12 460 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 SPATS2Q86XZ4 545 aaKnown RBP21.04■□□□□ 0.96
CCM2-203ENST00000461377 TAB3Q8N5C8 712 aaPredicted RBP21.04■□□□□ 0.96
CCM2-203ENST00000461377 CCDC185Q8N715 623 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 MAML1Q92585 1016 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 CHMP6Q96FZ7 201 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 ZNF317Q96PQ6 595 aaPredicted RBP21.04■□□□□ 0.96
CCM2-203ENST00000461377 SYT15Q9BQS2 421 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 MED10Q9BTT4 135 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 UBN1Q9NPG3 1134 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 XPO7Q9UIA9 1087 aaKnown RBP21.04■□□□□ 0.96
CCM2-203ENST00000461377 HEY1Q9Y5J3 304 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 ACTL7BQ9Y614 415 aa21.04■□□□□ 0.96
CCM2-203ENST00000461377 CLUHO75153 1309 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 MGEA5O60502 916 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 FAM200BP0CF97 657 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 DRD4P21917 467 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 SULT1E1P49888 294 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 RAB27AP51159 221 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 GPX6P59796 221 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 DSC3Q14574 896 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 OTUD1Q5VV17 481 aaPredicted RBP21.03■□□□□ 0.96
CCM2-203ENST00000461377 NDRG1Q92597 394 aaKnown RBP21.03■□□□□ 0.96
CCM2-203ENST00000461377 WDR83Q9BRX9 315 aaKnown RBP21.03■□□□□ 0.96
CCM2-203ENST00000461377 PPCSQ9HAB8 311 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 LRRC4Q9HBW1 653 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 PAK5Q9P286 719 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 TBK1Q9UHD2 729 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 TMEM120BA0PK00 339 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 GHRP10912 638 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 ZFXP17010 805 aaPredicted RBP21.03■□□□□ 0.96
CCM2-203ENST00000461377 RNASELQ05823 741 aaKnown RBP21.03■□□□□ 0.96
CCM2-203ENST00000461377 KCNJ11Q14654 390 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 QPCTQ16769 361 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 DSTYKQ6XUX3 929 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 BNIPLQ7Z465 357 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 TADA2BQ86TJ2 420 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 ANKMY2Q8IV38 441 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 NT5C3BQ969T7 300 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 FAM149B1Q96BN6 582 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 CSPG4P5Q96PW8 444 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 KRT82Q9NSB4 513 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 GGA2Q9UJY4 613 aa21.03■□□□□ 0.96
CCM2-203ENST00000461377 TMEM88BA6NKF7 163 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 FOXO6A8MYZ6 492 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 KCNN4O15554 427 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 ZBED1O96006 694 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 PRKAR2AP13861 404 aaKnown RBP21.02■□□□□ 0.96
CCM2-203ENST00000461377 RBL1P28749 1068 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 NOS2P35228 1153 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 YWHAZP63104 245 aaKnown RBP21.02■□□□□ 0.96
CCM2-203ENST00000461377 UPP1Q16831 310 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 FAM35AQ86V20 835 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 ATP11CQ8NB49 1132 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 PYROXD1Q8WU10 500 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 SLC2A13Q96QE2 648 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 MAGEB5Q9BZ81 275 aa21.02■□□□□ 0.96
CCM2-203ENST00000461377 FZD10Q9ULW2 581 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms