RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SLC5A4Q9NY91 659 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 KCNK4Q9NYG8 393 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 MORF4L1Q9UBU8 362 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 CYTH4Q9UIA0 394 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 CHMP2BQ9UQN3 213 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 STK38LQ9Y2H1 464 aa9.19□□□□□ -0.94
HDAC3-202ENST00000459727 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-202ENST00000459727 A0A087WZ62 844 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 A0A1W2PPM1 405 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 A8MXQ7 604 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 E5RJQ4 531 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 AP3B1O00203 1094 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 TSPAN1O60635 241 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 ANP32DO95626 131 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 APOEP02649 317 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 ARF4P18085 180 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 ADRA1DP25100 572 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 ARL4AP40617 200 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 MAGEA3P43357 314 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 GCLCP48506 637 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 CDH8P55286 799 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 YWHAZP63104 245 aaKnown RBP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 MGAT5Q09328 741 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 SNAPC2Q13487 334 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 KBTBD12Q3ZCT8 623 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 CCDC14Q49A88 953 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 PKDCCQ504Y2 493 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 EFHC1Q5JVL4 640 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 C6orf163Q5TEZ5 329 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 PRAMEF18Q5VWM3 479 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 NOTUMQ6P988 496 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 SLC27A1Q6PCB7 646 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 MTHFD1LQ6UB35 978 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 TIFABQ6ZNK6 161 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 CAPN12Q6ZSI9 719 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 PDZD4Q76G19 769 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 ARMCX2Q7L311 632 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 CLNKQ7Z7G1 428 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 PRUNE1Q86TP1 453 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 KIAA0319LQ8IZA0 1049 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 ENDOVQ8N8Q3 282 aaKnown RBP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 CEP120Q8N960 986 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 AGAP11Q8TF27 550 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 FAM172AQ8WUF8 416 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 N4BP2L2Q92802 583 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 TBC1D31Q96DN5 1066 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 TNIP3Q96KP6 325 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 QKIQ96PU8 341 aaKnown RBP eCLIP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 FDXACB1Q9BRP7 624 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 BRD8Q9H0E9 1235 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 CXorf56Q9H5V9 222 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 DCLRE1BQ9H816 532 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 POPDC2Q9HBU9 364 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 NPHS2Q9NP85 383 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 NGRNQ9NPE2 291 aaKnown RBP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 ETNK2Q9NVF9 386 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 RBPJLQ9UBG7 517 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 STOML1Q9UBI4 398 aa9.18□□□□□ -0.94
HDAC3-202ENST00000459727 UBQLN1Q9UMX0 589 aaKnown RBP9.18□□□□□ -0.94
HDAC3-202ENST00000459727 H3BRJ5 948 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 MTSS1O43312 755 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 OPHN1O60890 802 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 MYL4P12829 197 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 HOXD8P13378 290 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 CYP2F1P24903 491 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 CRHR1P34998 444 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 GARSP41250 739 aaKnown RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 ETV4P43268 484 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 SERPINB4P48594 390 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 RPL34P49207 117 aaKnown RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 CLNS1AP54105 237 aaKnown RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 HIRAP54198 1017 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 ADCY1Q08828 1119 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 SEMA5AQ13591 1074 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 PRKD1Q15139 912 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 E2F5Q15329 346 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 NBPF20Q3BBV1 942 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 SV2CQ496J9 727 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 DNAL1Q4LDG9 190 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 MSS51Q4VC12 460 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 TAF1BQ53T94 588 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 HP1BP3Q5SSJ5 553 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 HEATR6Q6AI08 1181 aaKnown RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 TLDC1Q6P9B6 456 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 DPH6Q7L8W6 267 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 ZC3H18Q86VM9 953 aaKnown RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 CTAGE3PQ8IX95 158 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 LMNTD2Q8IXW0 634 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 ANKRD52Q8NB46 1076 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 GPRC5AQ8NFJ5 357 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 NSMCE1Q8WV22 266 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 SLC35F5Q8WV83 523 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 SREK1Q8WXA9 508 aaKnown RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 CENPIQ92674 756 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-202ENST00000459727 TTC17Q96AE7 1141 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 NSL1Q96IY1 281 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 SNX27Q96L92 541 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 TWNKQ96RR1 684 aa9.17□□□□□ -0.94
HDAC3-202ENST00000459727 PEBP4Q96S96 227 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms