RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 TBC1D14Q9P2M4 693 aa16.12■□□□□ 0.17
CROCCP4-201ENST00000457096 SPTBN2O15020 2390 aa16.12■□□□□ 0.17
CROCCP4-201ENST00000457096 TBC1D3BA6NDS4 549 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 RARGP13631 454 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 GRIA2P42262 883 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 PRCPP42785 496 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 TUBP50607 506 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 MRPS21P82921 87 aaKnown RBP16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 GAD2Q05329 585 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 STPG1Q5TH74 334 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 ISM2Q6H9L7 571 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 TOGARAM2Q6ZUX3 1019 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 ARMCX6Q7L4S7 300 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 HMGB4Q8WW32 186 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 NDRG1Q92597 394 aaKnown RBP16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 ACOX2Q99424 681 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 IMPG2Q9BZV3 1241 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 TLR8Q9NR97 1041 aaKnown RBP16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 COMMD8Q9NX08 183 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 SCML2Q9UQR0 700 aa16.11■□□□□ 0.17
CROCCP4-201ENST00000457096 TCRBV21S2A2A0A5A6 115 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 BCLAF3A2AJT9 711 aaKnown RBP16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 TRIM49BA6NDI0 452 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 NEDD8-MDP1E9PL57 170 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 HOXC11O43248 304 aaPredicted RBP16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 CAVIN2O95810 425 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 HMBSP08397 361 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 ELF2Q15723 593 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 CBWD6Q4V339 395 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 USP39Q53GS9 565 aaKnown RBP16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 CBWD3Q5JTY5 395 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 CBWD5Q5RIA9 395 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 C10orf76Q5T2E6 689 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 EGFLAMQ63HQ2 1017 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 PMS2CLQ68D20 193 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 DEFB119Q8N690 84 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 CNOT6LQ96LI5 555 aaKnown RBP16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 HEXIM2Q96MH2 286 aaKnown RBP16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 FBXO44Q9H4M3 255 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 CYP3A43Q9HB55 503 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 PLK2Q9NYY3 685 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 MBD1Q9UIS9 605 aaPredicted RBP16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 NAGPAQ9UK23 515 aa16.1■□□□□ 0.17
CROCCP4-201ENST00000457096 A0A0A0MRY4 1105 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 TULP2O00295 520 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 TM4SF5O14894 197 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 RHOBTB1O94844 696 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 RPL13P26373 211 aaKnown RBP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 ATP5C1P36542 298 aaKnown RBP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 EIF2DP41214 584 aaKnown RBP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 DHPSP49366 369 aaPredicted RBP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 MXI1P50539 228 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 KIF11P52732 1056 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 C10orf120Q5SQS8 335 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 BTBD8Q5XKL5 378 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 KRT39Q6A163 491 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 IL31Q6EBC2 164 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 HTR3DQ70Z44 454 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 FMR1NBQ8N0W7 255 aaPredicted RBP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 ZNF513Q8N8E2 541 aaPredicted RBP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 KIAA1958Q8N8K9 716 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 SLC4A11Q8NBS3 891 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 DUSP16Q9BY84 665 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 CYLDQ9NQC7 956 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 VPS45Q9NRW7 570 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 CISHQ9NSE2 258 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 DNAJC17Q9NVM6 304 aaKnown RBP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 BCCIPQ9P287 314 aaKnown RBP eCLIP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 DEC1Q9P2X7 70 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 PCDHGA5Q9Y5G8 931 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 ATXN2Q99700 1313 aaKnown RBP16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 MYH10P35580 1976 aa16.09■□□□□ 0.17
CROCCP4-201ENST00000457096 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 PRRT4C9JH25 899 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 KLKB1P03952 638 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 ADRB1P08588 477 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 TYRP14679 529 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 TNFRSF4P43489 277 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 RAD23BP54727 409 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 LRMPQ12912 555 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 EDRF1Q3B7T1 1238 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 TCERG1LQ5VWI1 586 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 ANKRD40Q6AI12 368 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 TMEFF1Q8IYR6 380 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 ABCA7Q8IZY2 2146 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 PGBD3Q8N328 593 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 TERB1Q8NA31 727 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 OLIG1Q8TAK6 271 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 OTUB2Q96DC9 234 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 EDEM2Q9BV94 578 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 BBS2Q9BXC9 721 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 SLC6A17Q9H1V8 727 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 CD93Q9NPY3 652 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 FSCN3Q9NQT6 498 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 RAB20Q9NX57 234 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 RASAL2Q9UJF2 1139 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 SPAG17Q6Q759 2223 aa16.08■□□□□ 0.16
CROCCP4-201ENST00000457096 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms