RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 BCAT1P54687 386 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 HDAC4P56524 1084 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 SATB1Q01826 763 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 FSTL1Q12841 308 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 MYO1EQ12965 1108 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 LSAMPQ13449 338 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TNFAIP1Q13829 316 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 ADRM1Q16186 407 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 BOLA3Q53S33 107 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 DRICH1Q6PGQ1 229 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRAT1Q6PIZ9 186 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 PRR23BQ6ZRT6 265 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 CHST3Q7LGC8 479 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 ANKS1BQ7Z6G8 1248 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 NLRP10Q86W26 655 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 KRT73Q86Y46 540 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 RHOT1Q8IXI2 618 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 WDTC1Q8N5D0 677 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TDRD5Q8NAT2 981 aaKnown RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 USP38Q8NB14 1042 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 POGLUT1Q8NBL1 392 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 CCDC148Q8NFR7 591 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 GPR150Q8NGU9 434 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 KIF18AQ8NI77 898 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 SETD6Q8TBK2 473 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 DLG3Q92796 817 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TEKT1Q969V4 418 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRIM43Q96BQ3 446 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 MAP6Q96JE9 813 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 VPS50Q96JG6 964 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 CLPTM1LQ96KA5 538 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 FCRL2Q96LA5 508 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 MRGPRX1Q96LB2 322 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 P2RX7Q99572 595 aaKnown RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 JAM3Q9BX67 310 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 KLHL4Q9C0H6 718 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 ANKRD2Q9GZV1 360 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 BRD8Q9H0E9 1235 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 RWDD1Q9H446 243 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 C19orf44Q9H6X5 657 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 VEZTQ9HBM0 779 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZBTB40Q9NUA8 1239 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 CHCHD3Q9NX63 227 aaKnown RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 DDX43Q9NXZ2 648 aaKnown RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 CLDND1Q9NY35 253 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 LPAR3Q9UBY5 353 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 GPR160Q9UJ42 338 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 PTBP2Q9UKA9 531 aaKnown RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TMED5Q9Y3A6 229 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 PCDHA1Q9Y5I3 950 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 SPAG9O60271 1321 aaKnown RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 MYPNQ86TC9 1320 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 MAN2B1O00754 1011 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 TSPAN4O14817 238 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF263O14978 683 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 KLK10O43240 276 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 HNRNPRO43390 633 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 DNPH1O43598 174 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 PEX11AO75192 247 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 E2F6O75461 281 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 CAMTA2O94983 1202 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF205O95201 554 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 TPOP07202 933 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 SPARCP09486 303 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 HSPA5P11021 654 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 NEFHP12036 1026 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 COL6A2P12110 1019 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 IFNGR1P15260 489 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ENDOUP21128 410 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 MCAMP43121 646 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 KIR2DL1P43626 348 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 KIR2DL2P43627 348 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 SESN2P58004 480 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 CCNA1P78396 465 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ATP8B2P98198 1209 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 CYP4A11Q02928 519 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 GBE1Q04446 702 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 KRT17Q04695 432 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 SPIRE1Q08AE8 756 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZBTB17Q13105 803 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 BMPR2Q13873 1038 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 RCN2Q14257 317 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRIM25Q14258 630 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 NFIL3Q16649 462 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZNF827Q17R98 1081 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 CCDC40Q4G0X9 1142 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 KHDC1Q4VXA5 237 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 SLC44A4Q53GD3 710 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 KRBOX4Q5JUW0 171 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 PLEKHS1Q5SXH7 462 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 NAA35Q5VZE5 725 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ADALQ6DHV7 355 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 ZPBP2Q6X784 338 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 MEX3BQ6ZN04 569 aaKnown RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 SPPL2CQ8IUH8 684 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 HDDC3Q8N4P3 179 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 AFAP1Q8N556 730 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 FRMD1Q8N878 549 aa4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 DRAXINQ8NBI3 349 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P21-201ENST00000452483 GMCL1P1Q8NEA9 526 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms