RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KLHL40Q2TBA0 621 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 GJB7Q6PEY0 223 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 TXNDC11Q6PKC3 985 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 PRR23BQ6ZRT6 265 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 ENOSF1Q7L5Y1 443 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 EFCAB3Q8N7B9 438 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 ANKRD20A12PQ8NF67 263 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 NETO1Q8TDF5 533 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 MS4A3Q96HJ5 214 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 ZFYVE19Q96K21 471 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 FAM81BQ96LP2 452 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 KREMEN1Q96MU8 473 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 CYP2S1Q96SQ9 504 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 NAT10Q9H0A0 1025 aaKnown RBP15.35■□□□□ 0.05
USP39-206ENST00000448971 RBM12Q9NTZ6 932 aaKnown RBP15.35■□□□□ 0.05
USP39-206ENST00000448971 C2orf42Q9NWW7 574 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 CACNA1GO43497 2377 aa15.35■□□□□ 0.05
USP39-206ENST00000448971 LAMA1P25391 3075 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.34■□□□□ 0.05
USP39-206ENST00000448971 HHLA1C9JL84 531 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 M0QYV0 167 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 O00370 1275 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 GDF9O60383 454 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 OAS1P00973 400 aaKnown RBP15.34■□□□□ 0.05
USP39-206ENST00000448971 HOXC13P31276 330 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 CNR2P34972 360 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 USP8P40818 1118 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 SOX9P48436 509 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 APBA1Q02410 837 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 BST2Q10589 180 aaKnown RBP15.34■□□□□ 0.05
USP39-206ENST00000448971 ANO6Q4KMQ2 910 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 MIIPQ5JXC2 388 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 CDKAL1Q5VV42 579 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 PIGZQ86VD9 579 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 TTC30AQ86WT1 665 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 AOPEPQ8N6M6 819 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 ANKRD52Q8NB46 1076 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 SH3RF2Q8TEC5 729 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 MSANTD3Q96H12 275 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 C8orf33Q9H7E9 229 aaPredicted RBP15.34■□□□□ 0.05
USP39-206ENST00000448971 TLR8Q9NR97 1041 aaKnown RBP15.34■□□□□ 0.05
USP39-206ENST00000448971 SMPD4Q9NXE4 827 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 ARHGAP26Q9UNA1 814 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 CPQQ9Y646 472 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 DENND4CQ5VZ89 1909 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 ATG2BQ96BY7 2078 aa15.34■□□□□ 0.05
USP39-206ENST00000448971 FAM92AA1XBS5 289 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 XPO1O14980 1071 aaKnown RBP15.33■□□□□ 0.04
USP39-206ENST00000448971 SETSIPP0DME0 302 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 PON1P27169 355 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 HOXA6P31267 233 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 IFNAR2P48551 515 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 KPNA1P52294 538 aaPredicted RBP15.33■□□□□ 0.04
USP39-206ENST00000448971 PDE4CQ08493 712 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 STILQ15468 1287 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 ZNF77Q15935 545 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 PPM1JQ5JR12 505 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 HECTD3Q5T447 861 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 C1orf228Q6PIY5 440 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 PRR23CQ6ZRP0 262 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 Q6ZS52 159 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 LONP2Q86WA8 852 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 TTC8Q8TAM2 541 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 RIN3Q8TB24 985 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 FANCLQ9NW38 375 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 IL37Q9NZH6 218 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 CHORDC1Q9UHD1 332 aaPredicted RBP15.33■□□□□ 0.04
USP39-206ENST00000448971 KIAA1257Q9ULG3 409 aa15.33■□□□□ 0.04
USP39-206ENST00000448971 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.33■□□□□ 0.04
USP39-206ENST00000448971 KIF26AQ9ULI4 1882 aaPredicted RBP15.32■□□□□ 0.04
USP39-206ENST00000448971 SPECC1L-ADORA2AF8WAN1 911 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 COCHO43405 550 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 TLR5O60602 858 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 OLFM2O95897 454 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 CALCAP01258 141 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 TUBP50607 506 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 KIF11P52732 1056 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 ZNF132P52740 706 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 TNK2Q07912 1038 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 CCINQ13939 588 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 LRRC32Q14392 662 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 KRT31Q15323 416 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 DGKKQ5KSL6 1271 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 FKBP15Q5T1M5 1219 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 TRIM68Q6AZZ1 485 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 RALGPS2Q86X27 583 aaPredicted RBP15.32■□□□□ 0.04
USP39-206ENST00000448971 DDX42Q86XP3 938 aaKnown RBP eCLIP15.32■□□□□ 0.04
USP39-206ENST00000448971 SIX6OS1Q8N1H7 587 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 UBA3Q8TBC4 463 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 TFAP2BQ92481 460 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 LSM14BQ9BX40 385 aaKnown RBP15.32■□□□□ 0.04
USP39-206ENST00000448971 VPS16Q9H269 839 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 CCSER2Q9H7U1 834 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 LRRC4Q9HBW1 653 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 GTSE1Q9NYZ3 720 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 NAGPAQ9UK23 515 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 SCML2Q9UQR0 700 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 WNT6Q9Y6F9 365 aa15.32■□□□□ 0.04
USP39-206ENST00000448971 HELZP42694 1942 aaKnown RBP15.32■□□□□ 0.04
USP39-206ENST00000448971 CEP295Q9C0D2 2601 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms