RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 FBXW8Q8N3Y1 598 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 EPS15L1Q9UBC2 864 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 SDR42E2A6NKP2 422 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 EIF3FO00303 357 aaPredicted RBP19.88■□□□□ 0.77
HMGA1-205ENST00000447654 MSH4O15457 936 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 LDHAP00338 332 aaKnown RBP19.88■□□□□ 0.77
HMGA1-205ENST00000447654 STAT2P52630 851 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 ARHGAP44Q17R89 818 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 MIER3Q7Z3K6 550 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 TDRD1Q9BXT4 1180 aaKnown RBP19.88■□□□□ 0.77
HMGA1-205ENST00000447654 HIPK3Q9H422 1215 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 ZHX3Q9H4I2 956 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 FBXO28Q9NVF7 368 aa19.88■□□□□ 0.77
HMGA1-205ENST00000447654 MCF2LO15068 1137 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 MGEA5O60502 916 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 SULT1C4O75897 302 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 EGFRP00533 1210 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 POLR2EP19388 210 aaKnown RBP19.87■□□□□ 0.77
HMGA1-205ENST00000447654 CXCL9Q07325 125 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 ADGRE1Q14246 886 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 KCTD21Q4G0X4 260 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 METTL21CQ5VZV1 264 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 GSTA5Q7RTV2 222 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 AMIGO2Q86SJ2 522 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 GPR180Q86V85 440 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 CRLF3Q8IUI8 442 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 PEX5LQ8IYB4 626 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 POU5F2Q8N7G0 328 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 DCAKDQ8WVC6 231 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 PAIP1Q9H074 479 aaKnown RBP19.87■□□□□ 0.77
HMGA1-205ENST00000447654 GID8Q9NWU2 228 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 TRNAU1APQ9NX07 287 aaKnown RBP19.87■□□□□ 0.77
HMGA1-205ENST00000447654 GNEQ9Y223 722 aaKnown RBP19.87■□□□□ 0.77
HMGA1-205ENST00000447654 SPO11Q9Y5K1 396 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 ZNF536O15090 1300 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 K7EPI3 171 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 PABPC1P11940 636 aaKnown RBP19.87■□□□□ 0.77
HMGA1-205ENST00000447654 MYL4P12829 197 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 PSMD6Q15008 389 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 ARL13BQ3SXY8 428 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 MOXD1Q6UVY6 613 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 PPM1KQ8N3J5 372 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 APBB2Q92870 758 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 SMYD3Q9H7B4 428 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 OLFML3Q9NRN5 406 aa19.87■□□□□ 0.77
HMGA1-205ENST00000447654 UBE4BO95155 1302 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 H6PDO95479 791 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 INHBBP09529 407 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 GAP43P17677 238 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 PSMC3P17980 439 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 TXNL4AP83876 142 aaKnown RBP19.86■□□□□ 0.77
HMGA1-205ENST00000447654 SLC25A3Q00325 362 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 OASLQ15646 514 aaKnown RBP19.86■□□□□ 0.77
HMGA1-205ENST00000447654 SPOPLQ6IQ16 392 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 PCGF5Q86SE9 256 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 LSM14AQ8ND56 463 aaKnown RBP19.86■□□□□ 0.77
HMGA1-205ENST00000447654 TTC17Q96AE7 1141 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 CCDC138Q96M89 665 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 MRPL46Q9H2W6 279 aaKnown RBP19.86■□□□□ 0.77
HMGA1-205ENST00000447654 FAM96AQ9H5X1 160 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 VAV3Q9UKW4 847 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 ZNRF3Q9ULT6 936 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 SCINQ9Y6U3 715 aa19.86■□□□□ 0.77
HMGA1-205ENST00000447654 WNT10BO00744 389 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 PFDN6O15212 129 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 CIITAP33076 1130 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 GPX6P59796 221 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 ESRRGP62508 458 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 UBXN2AP68543 259 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 FASTKD3Q14CZ7 662 aaKnown RBP19.85■□□□□ 0.77
HMGA1-205ENST00000447654 MOGQ16653 247 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 SLFN12Q8IYM2 578 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 ZNF420Q8TAQ5 688 aaPredicted RBP19.85■□□□□ 0.77
HMGA1-205ENST00000447654 FAM111AQ96PZ2 611 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 PCDHB18PQ96TA0 734 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 CTRCQ99895 268 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 ALG13Q9NP73 1137 aaKnown RBP19.85■□□□□ 0.77
HMGA1-205ENST00000447654 NOCTQ9UK39 431 aaKnown RBP19.85■□□□□ 0.77
HMGA1-205ENST00000447654 IGLV3-22A0A075B6J6 115 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 TMEM114B3SHH9 223 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 E5RJQ4 531 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 PSTPIP1O43586 416 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 KDM1AO60341 852 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 ZBTB11O95625 1053 aaPredicted RBP19.85■□□□□ 0.77
HMGA1-205ENST00000447654 TTKP33981 857 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 SLC5A3P53794 718 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 ALDH18A1P54886 795 aaKnown RBP19.85■□□□□ 0.77
HMGA1-205ENST00000447654 AQP5P55064 265 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 ANKDD1AQ495B1 522 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 SMUG1Q53HV7 270 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 MDH1BQ5I0G3 518 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 SH2D5Q6ZV89 423 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 ARID3BQ8IVW6 561 aaPredicted RBP19.85■□□□□ 0.77
HMGA1-205ENST00000447654 KCTD17Q8N5Z5 321 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 PCYOX1LQ8NBM8 494 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 LMO3Q8TAP4 145 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 CMTM5Q96DZ9 223 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 ZBED3Q96IU2 234 aaPredicted RBP19.85■□□□□ 0.77
HMGA1-205ENST00000447654 WDR18Q9BV38 432 aa19.85■□□□□ 0.77
HMGA1-205ENST00000447654 QPCTLQ9NXS2 382 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms