RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 BCKDHBP21953 392 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 GRIA2P42262 883 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 MXI1P50539 228 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 ANO4Q32M45 955 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 PPM1JQ5JR12 505 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 PPP1R26Q5T8A7 1209 aaPredicted RBP19.2■□□□□ 0.66
COL9A1-205ENST00000447041 TCEAL6Q6IPX3 200 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 FMR1NBQ8N0W7 255 aaPredicted RBP19.2■□□□□ 0.66
COL9A1-205ENST00000447041 CCDC150Q8NCX0 1101 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 TCEAL3Q969E4 200 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 PNPLA8Q9NP80 782 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 NUDT5Q9UKK9 219 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 PCDHA5Q9Y5H7 936 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 SDK1Q7Z5N4 2213 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 TRIM24O15164 1050 aa19.19■□□□□ 0.66
COL9A1-205ENST00000447041 ADAM23O75077 832 aa19.19■□□□□ 0.66
COL9A1-205ENST00000447041 RHOBTB1O94844 696 aa19.19■□□□□ 0.66
COL9A1-205ENST00000447041 EPB41P11171 864 aaKnown RBP19.19■□□□□ 0.66
COL9A1-205ENST00000447041 GTF2H1P32780 548 aa19.19■□□□□ 0.66
COL9A1-205ENST00000447041 ATP5C1P36542 298 aaKnown RBP19.19■□□□□ 0.66
COL9A1-205ENST00000447041 PRCPP42785 496 aa19.19■□□□□ 0.66
COL9A1-205ENST00000447041 MCCD1P59942 119 aaPredicted RBP19.19■□□□□ 0.66
COL9A1-205ENST00000447041 CREB5Q02930 508 aa19.19■□□□□ 0.66
COL9A1-205ENST00000447041 USP39Q53GS9 565 aaKnown RBP19.19■□□□□ 0.66
COL9A1-205ENST00000447041 BTBD8Q5XKL5 378 aa19.19■□□□□ 0.66
COL9A1-205ENST00000447041 PMS2CLQ68D20 193 aa19.19■□□□□ 0.66
COL9A1-205ENST00000447041 ERCC4Q92889 916 aaPredicted RBP19.19■□□□□ 0.66
COL9A1-205ENST00000447041 ARID3AQ99856 593 aa19.19■□□□□ 0.66
COL9A1-205ENST00000447041 RARGP13631 454 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 TNFRSF4P43489 277 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 KIF11P52732 1056 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 LIMK1P53667 647 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 HSF5Q4G112 596 aaPredicted RBP19.18■□□□□ 0.66
COL9A1-205ENST00000447041 HTR3DQ70Z44 454 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 TERB1Q8NA31 727 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 FBXL13Q8NEE6 735 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 CCDC34Q96HJ3 373 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 DUSP16Q9BY84 665 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 VPS45Q9NRW7 570 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 CISHQ9NSE2 258 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.18■□□□□ 0.66
COL9A1-205ENST00000447041 RAB20Q9NX57 234 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 DEC1Q9P2X7 70 aa19.18■□□□□ 0.66
COL9A1-205ENST00000447041 BCLAF3A2AJT9 711 aaKnown RBP19.17■□□□□ 0.66
COL9A1-205ENST00000447041 TBC1D3BA6NDS4 549 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 NEDD8-MDP1E9PL57 170 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 CETN3O15182 167 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 ADRB1P08588 477 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 KCNA4P22459 653 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 PMS1P54277 932 aaKnown RBP19.17■□□□□ 0.66
COL9A1-205ENST00000447041 CBWD6Q4V339 395 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 DCAF17Q5H9S7 520 aaPredicted RBP19.17■□□□□ 0.66
COL9A1-205ENST00000447041 CBWD3Q5JTY5 395 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 EOGTQ5NDL2 527 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 CBWD5Q5RIA9 395 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 C10orf76Q5T2E6 689 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 IL31Q6EBC2 164 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 TPGS1Q6ZTW0 290 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 CCDC186Q7Z3E2 898 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 SCD5Q86SK9 330 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 SLC4A11Q8NBS3 891 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 OLIG1Q8TAK6 271 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 RLN3Q8WXF3 142 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 TATDN2Q93075 761 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 HEXIM2Q96MH2 286 aaKnown RBP19.17■□□□□ 0.66
COL9A1-205ENST00000447041 RMND1Q9NWS8 449 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 NAGPAQ9UK23 515 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 LSM7Q9UK45 103 aaKnown RBP19.17■□□□□ 0.66
COL9A1-205ENST00000447041 HCN2Q9UL51 889 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 THADAQ6YHU6 1953 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 NUP205Q92621 2012 aa19.17■□□□□ 0.66
COL9A1-205ENST00000447041 LAMA1P25391 3075 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 TCRBV21S2A2A0A5A6 115 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 TRIM49BA6NDI0 452 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 ALDH1A2O94788 518 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 RAD23BP54727 409 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 GOLGA8FQ08AF8 430 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 GOLGA8DPQ0D2H9 430 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 C10orf120Q5SQS8 335 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 STPG1Q5TH74 334 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 ZNF658Q5TYW1 1059 aaPredicted RBP19.16■□□□□ 0.66
COL9A1-205ENST00000447041 TCERG1LQ5VWI1 586 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 KLHDC10Q6PID8 442 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 C11orf74Q86VG3 221 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 FRMD1Q8N878 549 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 ZNF513Q8N8E2 541 aaPredicted RBP19.16■□□□□ 0.66
COL9A1-205ENST00000447041 ENGASEQ8NFI3 743 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 HMGB4Q8WW32 186 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 TMEM176AQ96HP8 235 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 BBS2Q9BXC9 721 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 POLMQ9NP87 494 aaPredicted RBP19.16■□□□□ 0.66
COL9A1-205ENST00000447041 DNAJC17Q9NVM6 304 aaKnown RBP19.16■□□□□ 0.66
COL9A1-205ENST00000447041 BCCIPQ9P287 314 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL9A1-205ENST00000447041 CIZ1Q9ULV3 898 aaPredicted RBP19.16■□□□□ 0.66
COL9A1-205ENST00000447041 USP3Q9Y6I4 520 aa19.16■□□□□ 0.66
COL9A1-205ENST00000447041 ABCA7Q8IZY2 2146 aa19.15■□□□□ 0.66
COL9A1-205ENST00000447041 CACNG3O60359 315 aa19.15■□□□□ 0.66
COL9A1-205ENST00000447041 STX10O60499 249 aa19.15■□□□□ 0.66
COL9A1-205ENST00000447041 CAVIN2O95810 425 aa19.15■□□□□ 0.66
COL9A1-205ENST00000447041 TYRP14679 529 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms