RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 NF2P35240 595 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 MAP2K2P36507 400 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 RGS19P49795 217 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 ABATP80404 500 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 GUCY1A3Q02108 690 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 SLC12A1Q13621 1099 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 ARSIQ5FYB1 569 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 TDRD10Q5VZ19 366 aaKnown RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 FSTL4Q6MZW2 842 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 ESRP1Q6NXG1 681 aaKnown RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 WDTC1Q8N5D0 677 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 CFHR4Q92496 578 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 SYN2Q92777 582 aaPredicted RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 SLC35B4Q969S0 331 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 NCLNQ969V3 563 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 FIZ1Q96SL8 496 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 C19orf43Q9BQ61 176 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 FUZQ9BT04 418 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 GLIS2Q9BZE0 524 aaPredicted RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 MRPL37Q9BZE1 423 aaKnown RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 ZNF287Q9HBT7 754 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 RXFP1Q9HBX9 757 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 PLA2G3Q9NZ20 509 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 OR6C2Q9NZP2 312 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 CPNE7Q9UBL6 633 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 TIMM22Q9Y584 194 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 FHOD1Q9Y613 1164 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 NFS1Q9Y697 457 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 OR6C74A6NCV1 312 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ASNA1O43681 348 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 CBR3O75828 277 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 FTCDO95954 541 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ALPPP05187 535 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ALPPL2P10696 532 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ARNTP27540 789 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 MLLT6P55198 1093 aaPredicted RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 HAND2P61296 217 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ARF5P84085 180 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 PTSQ03393 145 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 NPRL3Q12980 569 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 CLN3Q13286 438 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 TDRD12Q587J7 1177 aaKnown RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 AAGABQ6PD74 315 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 KRT28Q7Z3Y7 464 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 RFX6Q8HWS3 928 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ZNF321PQ8N8H1 164 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 OR9A1PQ8NGU1 263 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.14□□□□□ -1.752e-7■■■■□ 19.9
UBR3-206ENST00000444475 MIPOL1Q8TD10 442 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 TBC1D5Q92609 795 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 CCDC140Q96MF4 163 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 WRNIP1Q96S55 665 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 KCNK16Q96T55 309 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 TUBB6Q9BUF5 446 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 PHF7Q9BWX1 381 aaPredicted RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 NSRP1Q9H0G5 558 aaKnown RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 HCFC1R1Q9NWW0 138 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 LPAR3Q9UBY5 353 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 GPN3Q9UHW5 284 aaPredicted RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 NOC2LQ9Y3T9 749 aaKnown RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 TEX264Q9Y6I9 313 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 A0A1B0GWJ7 208 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 A0A1W2PRV1 198 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 CIDEAO60543 219 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 OR2C1O95371 312 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 VNN2O95498 520 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 SERPINC1P01008 464 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 HMOX1P09601 288 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 MRPS9P82933 396 aaKnown RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 LINC01559Q495D7 138 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 CCDC14Q49A88 953 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ARHGAP15Q53QZ3 475 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ZBTB37Q5TC79 503 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 RRAGBQ5VZM2 374 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 PET117Q6UWS5 81 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ATF7IPQ6VMQ6 1270 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 TAGAPQ8N103 731 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 BANPQ8N9N5 519 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 XXYLT1Q8NBI6 393 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 NPLOC4Q8TAT6 608 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 DUSP19Q8WTR2 217 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 TSPEARQ8WU66 669 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 LMF1Q96S06 567 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 MLPHQ9BV36 600 aaPredicted RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 NUP85Q9BW27 656 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 IL21Q9HBE4 155 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 TMOD3Q9NYL9 352 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ANAPC5Q9UJX4 755 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ITGA11Q9UKX5 1188 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 CEP170Q5SW79 1584 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 TEX14Q8IWB6 1497 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 NPIPB15A6NHN6 443 aaPredicted RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 FAM86B1E9PN63 330 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 H0YCG3 227 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 MEIS2O14770 477 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 HDAC3O15379 428 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 RANBP6O60518 1105 aaKnown RBP4.14□□□□□ -1.75
UBR3-206ENST00000444475 GGPS1O95749 300 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 DDAH2O95865 285 aa4.14□□□□□ -1.75
UBR3-206ENST00000444475 ANXA1P04083 346 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms