RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 GRAMD1BQ3KR37 738 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 PCID2Q5JVF3 399 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 AKNAD1Q5T1N1 836 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 L1TD1Q5T7N2 865 aaKnown RBP5.73□□□□□ -1.49
PFDN4-202ENST00000441080 ZNF804AQ7Z570 1209 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 RASGRP3Q8IV61 690 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 SUN3Q8TAQ9 357 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 SORCS2Q96PQ0 1159 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 AGAP2Q99490 1192 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 PRPF18Q99633 342 aaKnown RBP5.73□□□□□ -1.49
PFDN4-202ENST00000441080 KRTAP4-2Q9BYR5 136 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 ALG13Q9NP73 1137 aaKnown RBP5.73□□□□□ -1.49
PFDN4-202ENST00000441080 DTNAQ9Y4J8 743 aa5.73□□□□□ -1.49
PFDN4-202ENST00000441080 LGALS16A8MUM7 142 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 A8MVJ9 347 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 TPD52L2O43399 206 aaKnown RBP5.72□□□□□ -1.49
PFDN4-202ENST00000441080 TCEA3O75764 348 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 GLP2RO95838 553 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 SPARCL1Q14515 664 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 PFKFB4Q16877 469 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 ZACNQ401N2 412 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 DENND2CQ68D51 928 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 MTHFD1LQ6UB35 978 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 PTCHD4Q6ZW05 846 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 SLC29A4Q7RTT9 530 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 NGDNQ8NEJ9 315 aaKnown RBP5.72□□□□□ -1.49
PFDN4-202ENST00000441080 FAM71BQ8TC56 605 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 TBC1D5Q92609 795 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 CTHRC1Q96CG8 243 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 VPS50Q96JG6 964 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 UROC1Q96N76 676 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 LENG8Q96PV6 779 aaPredicted RBP5.72□□□□□ -1.49
PFDN4-202ENST00000441080 WDR24Q96S15 920 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 CPNE5Q9HCH3 593 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 TMEM8AQ9HCN3 771 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 SNX15Q9NRS6 342 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 HELLSQ9NRZ9 838 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 ASB6Q9NWX5 421 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 INSL6Q9Y581 213 aa5.72□□□□□ -1.49
PFDN4-202ENST00000441080 NPC1O15118 1278 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 ASNA1O43681 348 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 TMPRSS11DO60235 418 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 PDE8BO95263 885 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 NPPBP16860 134 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 FPR3P25089 353 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 COL10A1Q03692 680 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 GALNT1Q10472 559 aaPredicted RBP5.71□□□□□ -1.5
PFDN4-202ENST00000441080 MTAPQ13126 283 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 ACOX1Q15067 660 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 CCDC38Q502W7 563 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 CCDC174Q6PII3 467 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 NAPRTQ6XQN6 538 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 GATAD2AQ86YP4 633 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 P3H2Q8IVL5 708 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 ATG16L2Q8NAA4 619 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 MORC4Q8TE76 937 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 RMDN3Q96TC7 470 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 MRIQ9BWK5 157 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 KLK15Q9H2R5 256 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 EPS8L2Q9H6S3 715 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 SYNPO2LQ9H987 977 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 MGAT4CQ9UBM8 478 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 LPAR3Q9UBY5 353 aa5.71□□□□□ -1.5
PFDN4-202ENST00000441080 J3KTA2 159 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 SYT5O00445 386 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 IFRD1O00458 451 aaPredicted RBP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 PCDH17O14917 1159 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 USP1O94782 785 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 FGAP02671 866 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 CSTBP04080 98 aaKnown RBP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 HNRNPCP07910 306 aaKnown RBP eCLIP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 MYCLP12524 364 aaPredicted RBP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 WT1P19544 449 aaPredicted RBP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 DRD1P21728 446 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 ITPKBP27987 946 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 MCM5P33992 734 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 CHKAP35790 457 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 PBX1P40424 430 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 ALDH18A1P54886 795 aaKnown RBP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 SOX10P56693 466 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 CYP4F2P78329 520 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 PSG6Q00889 435 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 PTK2BQ14289 1009 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 PDCD2Q16342 344 aaPredicted RBP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 TUBB8Q3ZCM7 444 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 ERAP2Q6P179 960 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 CEP85Q6P2H3 762 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 TLDC1Q6P9B6 456 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 AMIGO2Q86SJ2 522 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 TTC30AQ86WT1 665 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 STYXQ8WUJ0 223 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 LTV1Q96GA3 475 aaPredicted RBP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 BBC3Q96PG8 261 aaPredicted RBP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 TIMP4Q99727 224 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 NUDT22Q9BRQ3 303 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 THAP7Q9BT49 309 aaPredicted RBP5.7□□□□□ -1.5
PFDN4-202ENST00000441080 LRFN1Q9P244 771 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 ZNHIT2Q9UHR6 403 aa5.7□□□□□ -1.5
PFDN4-202ENST00000441080 ZNF213O14771 459 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms