RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 F5H423 210 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 NOP56O00567 594 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 BPGMP07738 259 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 APRTP07741 180 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 SLC5A2P31639 672 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 C1QBPQ07021 282 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 PDPK2PQ6A1A2 396 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 SCARA3Q6AZY7 606 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 TMEM179Q6ZVK1 233 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 PHF13Q86YI8 300 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 RTKN2Q8IZC4 609 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 LZICQ8WZA0 190 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 JADE3Q92613 823 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 MXRA8Q9BRK3 442 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 ANLNQ9NQW6 1124 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 DMTF1Q9Y222 760 aa11.97□□□□□ -0.49
HMGCS1-202ENST00000433297 E7ESA3 106 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 E9PBE3 544 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 CCNT2O60583 730 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 KLHL41O60662 606 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 RFPL1O75677 317 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 DGKIO75912 1065 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 MAPTP10636 758 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 TCN1P20061 433 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 RFC1P35251 1148 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 SLC1A6P48664 564 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 MPP3Q13368 585 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 TEX44Q53QW1 395 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 PQLC1Q8N2U9 271 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 PHTF2Q8N3S3 785 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 FBXW8Q8N3Y1 598 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 BSNDQ8WZ55 320 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 DDX56Q9NY93 547 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 SIRPGQ9P1W8 387 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 HERC5Q9UII4 1024 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 GNEQ9Y223 722 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 WDR64B1ANS9 1081 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 STAM2O75886 525 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 KRT38O76015 456 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 TNFAIP8O95379 198 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 VIL1P09327 827 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 MYCLP12524 364 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 ITGAXP20702 1163 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 MMP8P22894 467 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 IL1R2P27930 398 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 ABCD1P33897 745 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 STT3AP46977 705 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 TRIM72Q6ZMU5 477 aa11.96□□□□□ -0.49
HMGCS1-202ENST00000433297 FOXD2O60548 495 aaPredicted RBP11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 SERPINB5P36952 375 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 LIG4P49917 911 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 XIAPP98170 497 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 MYBPC1Q00872 1141 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 WASHC5Q12768 1159 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 SPP2Q13103 211 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 MMRN1Q13201 1228 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 SNAPC2Q13487 334 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 C16orf72Q14CZ0 275 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 NRF1Q16656 503 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 RARS2Q5T160 578 aaKnown RBP11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 C1QTNF12Q5T7M4 302 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 TATDN1Q6P1N9 297 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 TRMT10BQ6PF06 316 aaKnown RBP11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 CCDC33Q8N5R6 958 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 IL31RAQ8NI17 732 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 PPP4R1Q8TF05 950 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 TMIGD2Q96BF3 282 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 CMTM5Q96DZ9 223 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 VCPIP1Q96JH7 1222 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 BTBD9Q96Q07 612 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 SMYD2Q9NRG4 433 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 TEX264Q9Y6I9 313 aa11.96□□□□□ -0.5
HMGCS1-202ENST00000433297 ZNF536O15090 1300 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 FAM58BPP0C7Q3 252 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 CSH1P0DML2 217 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 CSH2P0DML3 217 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 ACO1P21399 889 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 CCR3P51677 355 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 PIGHQ14442 188 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 FAM182BQ5T319 152 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 MAP4K3Q8IVH8 894 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 ACTRT2Q8TDY3 377 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 USP13Q92995 863 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 CCT7Q99832 543 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 MRPS26Q9BYN8 205 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 SENP6Q9GZR1 1112 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 DOLKQ9UPQ8 538 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 SH3GLB1Q9Y371 365 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 TELO2Q9Y4R8 837 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 PPME1Q9Y570 386 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 NUB1Q9Y5A7 615 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 HEY1Q9Y5J3 304 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 NFASCO94856 1347 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 H3BNX3 289 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 TFPTP0C1Z6 253 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 GMPRP36959 345 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 NUDT2P50583 147 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 PKNOX1P55347 436 aa11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 NLRP11P59045 1033 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-202ENST00000433297 PLOD1Q02809 727 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms