RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 RAB27AP51159 221 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 KCNJ11Q14654 390 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 NOMO1Q15155 1222 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 ANKRD22Q5VYY1 191 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
DDX56-205ENST00000433257 ABHD15Q6UXT9 468 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 CYS1Q717R9 158 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 WDR75Q8IWA0 830 aaKnown RBP15.34■□□□□ 0.05
DDX56-205ENST00000433257 CPXCR1Q8N123 301 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 ACMSDQ8TDX5 336 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 SLC7A3Q8WY07 619 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 ZBTB10Q96DT7 871 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 RTP4Q96DX8 246 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 PARK7Q99497 189 aaKnown RBP15.34■□□□□ 0.05
DDX56-205ENST00000433257 KLC2Q9H0B6 622 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 RAVER2Q9HCJ3 691 aaKnown RBP15.34■□□□□ 0.05
DDX56-205ENST00000433257 CISHQ9NSE2 258 aa15.34■□□□□ 0.05
DDX56-205ENST00000433257 ZNF487B1APH4 448 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 KBTBD13C9JR72 458 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 LRCH4O75427 683 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 TMEM63AO94886 807 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 PYGBP11216 843 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 AOC1P19801 751 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 TGM2P21980 687 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 ARL2P36404 184 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 TMPRSS15P98073 1019 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 OGDHQ02218 1023 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 FAAP100Q0VG06 881 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 NAB1Q13506 487 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 CUL3Q13618 768 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 HNRNPDQ14103 355 aaKnown RBP15.33■□□□□ 0.04
DDX56-205ENST00000433257 EFTUD2Q15029 972 aaKnown RBP eCLIP15.33■□□□□ 0.047e-7■■■■□ 22.7
DDX56-205ENST00000433257 PDK2Q15119 407 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 KBTBD12Q3ZCT8 623 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 MSS51Q4VC12 460 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 THEMIS2Q5TEJ8 643 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 LMBRD2Q68DH5 695 aaPredicted RBP15.33■□□□□ 0.04
DDX56-205ENST00000433257 SDCCAG8Q86SQ7 713 aaPredicted RBP15.33■□□□□ 0.04
DDX56-205ENST00000433257 NME8Q8N427 588 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 TTC39CQ8N584 583 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 MCUQ8NE86 351 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 NRG4Q8WWG1 115 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 USP6NLQ92738 828 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 RPAP3Q9H6T3 665 aaPredicted RBP15.33■□□□□ 0.04
DDX56-205ENST00000433257 THAP1Q9NVV9 213 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 SOX13Q9UN79 622 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 CHMP2BQ9UQN3 213 aa15.33■□□□□ 0.04
DDX56-205ENST00000433257 GAS2O43903 313 aaKnown RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 ZNF189O75820 626 aaPredicted RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 HSPA1AP0DMV8 641 aaKnown RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 HSPA1BP0DMV9 641 aaKnown RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 PIM1P11309 404 aaPredicted RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 CRHR1P34998 444 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 ACTR2P61160 394 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 HIC1Q14526 733 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 DARS2Q6PI48 645 aaKnown RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 TIFABQ6ZNK6 161 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 NUDCD3Q8IVD9 361 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 DHX37Q8IY37 1157 aaKnown RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 FAF2Q96CS3 445 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 SERAC1Q96JX3 654 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 ECSITQ9BQ95 431 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 NIFKQ9BYG3 293 aaKnown RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 FBXO6Q9NRD1 293 aaPredicted RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 PPARGC1AQ9UBK2 798 aaKnown RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 PTPRJQ12913 1337 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 LRRIQ4A6NIV6 560 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 TRIM49D1C9J1S8 452 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 H3BRJ5 948 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 GOLGA8RI6L899 631 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 ENDOD1O94919 500 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 TNNC2P02585 160 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 OATP04181 439 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 CYP2C8P10632 490 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 TCF4P15884 667 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 GDF10P55107 478 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 CRHR2Q13324 411 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 MTERF2Q49AM1 385 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 CATSPERGQ6ZRH7 1159 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 EP400NLQ6ZTU2 488 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 ACAD11Q709F0 780 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 ULK2Q8IYT8 1036 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 STKLD1Q8NE28 680 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 SPATA18Q8TC71 538 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 NCSTNQ92542 709 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 CFHR5Q9BXR6 569 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 MRPL4Q9BYD3 311 aaKnown RBP15.32■□□□□ 0.04
DDX56-205ENST00000433257 PPP1R12CQ9BZL4 782 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 NMUR2Q9GZQ4 415 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 ZWILCHQ9H900 591 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 NRBP2Q9NSY0 501 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.32■□□□□ 0.04
DDX56-205ENST00000433257 PLA2G4CQ9UP65 541 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 COMMD3-BMI1R4GMX3 469 aa15.32■□□□□ 0.04
DDX56-205ENST00000433257 ADCY3O60266 1144 aa15.31■□□□□ 0.04
DDX56-205ENST00000433257 SNNO75324 88 aaPredicted RBP15.31■□□□□ 0.04
DDX56-205ENST00000433257 TOM1L1O75674 476 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms