RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 STK10O94804 968 aaKnown RBP5.34□□□□□ -1.56
RIF1-203ENST00000428287 COL6A2P12110 1019 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 PIK3CAP42336 1068 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 ECE1P42892 770 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 TFDP1Q14186 410 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 MSS51Q4VC12 460 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 TEDDM1Q5T9Z0 273 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 STXBP4Q6ZWJ1 553 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 MON1BQ7L1V2 547 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 XXYLT1Q8NBI6 393 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 GBA3Q9H227 469 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 INTS1Q8N201 2190 aaKnown RBP5.34□□□□□ -1.56
RIF1-203ENST00000428287 USP1O94782 785 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 HSPA13P48723 471 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 NCKAP1LP55160 1127 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 RPS8P62241 208 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 TNIP1Q15025 636 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 ZACNQ401N2 412 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 FRMD7Q6ZUT3 714 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 LILRA2Q8N149 483 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 LZTR1Q8N653 840 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PPP1R14CQ8TAE6 165 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 GIPC3Q8TF64 312 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PAFAH2Q99487 392 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 MRPL47Q9HD33 250 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 DDX18Q9NVP1 670 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 TMOD3Q9NYL9 352 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 RSL24D1Q9UHA3 163 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 TRIM17Q9Y577 477 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 SIN3BO75182 1162 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 DLATP10515 647 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 PROZP22891 400 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 BMXP51813 675 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 NAA20P61599 178 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 GPS1Q13098 491 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PDAP1Q13442 181 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 RARS2Q5T160 578 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 SNRNP48Q6IEG0 339 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 DEPTORQ8TB45 409 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 CPT1BQ92523 772 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PIGSQ96S52 555 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PSTPIP2Q9H939 334 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 BIN2Q9UBW5 565 aaPredicted RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 CDH22Q9UJ99 828 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 GIT1Q9Y2X7 761 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 CHD7Q9P2D1 2997 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PROCP04070 461 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 C6orf222P0C671 652 aaPredicted RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 GSTT2P0CG29 244 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 GSTT2BP0CG30 244 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 FUT4P22083 530 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 VAMP7P51809 220 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 GALNT2Q10471 571 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PRUNE1Q86TP1 453 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PPM1KQ8N3J5 372 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 MFSD2AQ8NA29 543 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PRPF31Q8WWY3 499 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 BORCS5Q969J3 196 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 COA7Q96BR5 231 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 SAYSD1Q9NPB0 183 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 ARHGEF38Q9NXL2 777 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 DNMT3BQ9UBC3 853 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 IFT52Q9Y366 437 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 NBEAQ8NFP9 2946 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PI4KAP42356 2102 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 ENDOD1O94919 500 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 OVGP1Q12889 678 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 ADGRE1Q14246 886 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 NHSL2Q5HYW2 709 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 FRA10AC1Q70Z53 315 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 WDR75Q8IWA0 830 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 TANKQ92844 425 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 CTRCQ99895 268 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 ACP6Q9NPH0 428 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 FAM237BA0A1B0GVD1 139 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 SLC22A2O15244 555 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 SLC22A1O15245 554 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 MAGEB3O15480 346 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 SULT1C4O75897 302 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 MAPK4P31152 587 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 CRHR1P34998 444 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 COPAP53621 1224 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 GTF2BQ00403 316 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 IL23RQ5VWK5 629 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 SV2AQ7L0J3 742 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PATL1Q86TB9 770 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 TRUB1Q8WWH5 349 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 RTP4Q96DX8 246 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 RTFDC1Q9BY42 306 aaPredicted RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 ANKRD60Q9BZ19 345 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 FAM96AQ9H5X1 160 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 GPCPD1Q9NPB8 672 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 C8orf4Q9NR00 106 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PPARGC1AQ9UBK2 798 aaKnown RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 RABGAP1Q9Y3P9 1069 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 CCT8P50990 548 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 ARSEP51690 589 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 ATG16L1Q676U5 607 aa5.33□□□□□ -1.56
RIF1-203ENST00000428287 PHF13Q86YI8 300 aaPredicted RBP5.33□□□□□ -1.56
RIF1-203ENST00000428287 TFB1MQ8WVM0 346 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms