RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 CDY1Q9Y6F8 540 aa8.18□□□□□ -1.1
CTNND1-207ENST00000426142 COL3A1P02461 1466 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 PCDH8O95206 1070 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 OAZ1P54368 228 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 EVX2Q03828 476 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 POU6F1Q14863 301 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 AP1ARQ63HQ0 302 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CCDC60Q8IWA6 550 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 IL17RAQ96F46 866 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 HMX1Q9NP08 348 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 C6orf203Q9P0P8 240 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CDV3Q9UKY7 258 aaKnown RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 MTO1Q9Y2Z2 717 aaKnown RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 DISP2A7MBM2 1401 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 A8MX80 341 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 SYNCRIPO60506 623 aaKnown RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 RNASEH1O60930 286 aaKnown RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 VPS26AO75436 327 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 LSM8O95777 96 aaKnown RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 UBA1P22314 1058 aaKnown RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 ST3GAL1Q11201 340 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 BMPR2Q13873 1038 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 TTLL9Q3SXZ7 439 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CXCL17Q6UXB2 119 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 TRPM8Q7Z2W7 1104 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 MCOLN2Q8IZK6 566 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 SOCS4Q8WXH5 440 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 HES6Q96HZ4 224 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 PPCSQ9HAB8 311 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 GIMAP4Q9NUV9 329 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 PLA2G4CQ9UP65 541 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 KLHL2O95198 593 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 PGK1P00558 417 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 USP17L7P0C7H9 530 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 GZMAP12544 262 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 BDNFP23560 247 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CENPAP49450 140 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 TBX4P57082 545 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 HPCAP84074 193 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CDC16Q13042 620 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CDKAL1Q5VV42 579 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 FBXW10Q5XX13 1052 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 NYAP1Q6ZVC0 841 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 ILDR1Q86SU0 546 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 HORMAD1Q86X24 394 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 SLC44A2Q8IWA5 706 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 RNF168Q8IYW5 571 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 VGLL2Q8N8G2 317 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 EME1Q96AY2 570 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 TUBGCP3Q96CW5 907 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 ADAM2Q99965 735 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 UBXN6Q9BZV1 441 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 DTNAQ9Y4J8 743 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 ARHGEF28Q8N1W1 1705 aaKnown RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 SCAMP3O14828 347 aaKnown RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 H2AFYO75367 372 aaKnown RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CCR1P32246 355 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 SERPINB8P50452 374 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 DLG4P78352 724 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 DNAL1Q4LDG9 190 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CATSPERGQ6ZRH7 1159 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 RD3Q7Z3Z2 195 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 LRRC6Q86X45 466 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 PHACTR4Q8IZ21 702 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 RIBC1Q8N443 379 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CMTM5Q96DZ9 223 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 CLPBQ9H078 707 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 LRRC4BQ9NT99 713 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 RBM22Q9NW64 420 aaKnown RBP eCLIP8.17□□□□□ -1.13e-6■■■■□ 26.3
CTNND1-207ENST00000426142 KANSL3Q9P2N6 904 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 TRPV2Q9Y5S1 764 aa8.17□□□□□ -1.1
CTNND1-207ENST00000426142 KDM4FA0A1W2PPD8 638 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ACADMP11310 421 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PCNAP12004 261 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ALOX15P16050 662 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 AMPD1P23109 780 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 TARSP26639 723 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 OR1E1P30953 314 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 MLH1P40692 756 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 SERPINB4P48594 390 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 NUDT2P50583 147 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 RAB27AP51159 221 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PLD1Q13393 1074 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 CSHL1Q14406 222 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ZNF284Q2VY69 593 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ITIH5Q86UX2 942 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 USP13Q92995 863 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 SERPINB12Q96P63 405 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 NFKBIZQ9BYH8 718 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ZNF556Q9HAH1 456 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 UTP6Q9NYH9 597 aaKnown RBP8.16□□□□□ -1.1
CTNND1-207ENST00000426142 HES2Q9Y543 173 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ACKR2O00590 384 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ADCY3O60266 1144 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PLA2G6O60733 806 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 ALDH1A2O94788 518 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 TUBP50607 506 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PWP1Q13610 501 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 PGS1Q32NB8 556 aa8.16□□□□□ -1.1
CTNND1-207ENST00000426142 CBWD6Q4V339 395 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms