RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SLC15A5A6NIM6 579 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 AMPD1P23109 780 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 PHBP35232 272 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 ADIGQ0VDE8 80 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 MAP2K5Q13163 448 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 KBTBD12Q3ZCT8 623 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 BOLA3Q53S33 107 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 TBC1D1Q86TI0 1168 aaPredicted RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 NT5DC4Q86YG4 428 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 ADAM32Q8TC27 787 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 LPPQ93052 612 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 KLC4Q9NSK0 619 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 MAD1L1Q9Y6D9 718 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 MYADML2A6NDP7 307 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 HUS1O60921 280 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 BEST1O76090 585 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 SUN1O94901 812 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 C6orf222P0C671 652 aaPredicted RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 HOXD8P13378 290 aaPredicted RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 SLC10A2Q12908 348 aaPredicted RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 NME3Q13232 169 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 SEPT7Q16181 437 aaKnown RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 DCAF6Q58WW2 860 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 FAM47CQ5HY64 1035 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 BSPRYQ5W0U4 402 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 LVRNQ6Q4G3 990 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 APBB1IPQ7Z5R6 666 aaPredicted RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 PRPF39Q86UA1 669 aaKnown RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 OSTM1Q86WC4 334 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 ADGRF2Q8IZF7 708 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 AGGF1Q8N302 714 aaeCLIP12.03□□□□□ -0.482e-6■■■□□ 18.6
UBR4-207ENST00000425413 KIF2BQ8N4N8 673 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 AP5M1Q9H0R1 490 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 CNTN3Q9P232 1028 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 AP4E1Q9UPM8 1137 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 SMIM35A0A1B0GVV1 85 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 ENDOD1O94919 500 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 ZNF865P0CJ78 1059 aaPredicted RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 GOT1P17174 413 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 ADRA1DP25100 572 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 GRIA1P42261 906 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 BST2Q10589 180 aaKnown RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 TRIP12Q14669 1992 aaPredicted RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 STILQ15468 1287 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 PAN2Q504Q3 1202 aaKnown RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 UBXN11Q5T124 520 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 WSCD1Q658N2 575 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 PIGZQ86VD9 579 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 LRRC52Q8N7C0 313 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 FAXDC2Q96IV6 333 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 MAGEB18Q96M61 343 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 MED10Q9BTT4 135 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 SLC17A7Q9P2U7 560 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 TRIM33Q9UPN9 1127 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 TCRBV9S1A1TA0A576 114 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 ASMTLO95671 621 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 STAU1O95793 577 aaKnown RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 STIP1P31948 543 aaKnown RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 GBP2P32456 591 aaPredicted RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 TAF6P49848 677 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 ZNF157P51786 506 aaPredicted RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 SPARCL1Q14515 664 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 ITIH4Q14624 930 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 EFHC2Q5JST6 749 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 SUGP1Q8IWZ8 645 aaKnown RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 DEFB106AQ8N104 65 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 TTC39CQ8N584 583 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 PPM1NQ8N819 430 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 ANKRD52Q8NB46 1076 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 NRDE2Q9H7Z3 1164 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 ACTR5Q9H9F9 607 aaPredicted RBP12.02□□□□□ -0.49
UBR4-207ENST00000425413 ETNK1Q9HBU6 452 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 SEPT10Q9P0V9 454 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 SLC45A1Q9Y2W3 748 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 IKBKGQ9Y6K9 419 aa12.02□□□□□ -0.49
UBR4-207ENST00000425413 MBLAC1A4D2B0 266 aaPredicted RBP12.01□□□□□ -0.49
UBR4-207ENST00000425413 PIRO00625 290 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 CREB3O43889 395 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 METTL18O95568 372 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 DESP17661 470 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 L1CAMP32004 1257 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 BCAT1P54687 386 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 LILRA4P59901 499 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 FAAP100Q0VG06 881 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 OVGP1Q12889 678 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 CST9Q5W186 159 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 RIBC1Q8N443 379 aaPredicted RBP12.01□□□□□ -0.49
UBR4-207ENST00000425413 SMG8Q8ND04 991 aaKnown RBP12.01□□□□□ -0.49
UBR4-207ENST00000425413 KCTD15Q96SI1 283 aaPredicted RBP12.01□□□□□ -0.49
UBR4-207ENST00000425413 LGMNQ99538 433 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 KDM4CQ9H3R0 1056 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 ACSS3Q9H6R3 686 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.01□□□□□ -0.49
UBR4-207ENST00000425413 MRPL42Q9Y6G3 142 aaKnown RBP12.01□□□□□ -0.49
UBR4-207ENST00000425413 C17orf102A2RUQ5 167 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 I3L4J1 428 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 CYB561D2O14569 222 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 UGT1A9O60656 530 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 SULT1E1P49888 294 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms