RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ATG4CQ96DT6 458 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 ZBTB10Q96DT7 871 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 ANKRD36BP1Q96IX9 119 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 FAM167AQ96KS9 214 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 TEPSINQ96N21 525 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 OLFM3Q96PB7 478 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 PANX3Q96QZ0 392 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 MTMR12Q9C0I1 747 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 C12orf65Q9H3J6 166 aaKnown RBP15.8■□□□□ 0.12
C9orf3-204ENST00000424143 PRDM16Q9HAZ2 1276 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 ALG13Q9NP73 1137 aaKnown RBP15.8■□□□□ 0.12
C9orf3-204ENST00000424143 DMAP1Q9NPF5 467 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-204ENST00000424143 ETAA1Q9NY74 926 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 NDUFA13Q9P0J0 144 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 CYTH4Q9UIA0 394 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 ITGA11Q9UKX5 1188 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 SOX13Q9UN79 622 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 RIPK3Q9Y572 518 aa15.8■□□□□ 0.12
C9orf3-204ENST00000424143 BUD23O43709 281 aaKnown RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 PEX1O43933 1283 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 CD48P09326 243 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 ALOX15P16050 662 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 ATICP31939 592 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 INHBEP58166 350 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 STX3Q13277 289 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 MXD4Q14582 209 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 STEAP4Q687X5 459 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 SLC9A4Q6AI14 798 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 PGM2L1Q6PCE3 622 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 CYP4V2Q6ZWL3 525 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 PRPF39Q86UA1 669 aaKnown RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 ALYREFQ86V81 257 aaKnown RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 CAND1Q86VP6 1230 aaKnown RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 KBTBD2Q8IY47 623 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 PPM1NQ8N819 430 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 GSDMBQ8TAX9 411 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 ADAM33Q9BZ11 813 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 TRIM4Q9C037 500 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 EPB41L1Q9H4G0 881 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 IFT122Q9HBG6 1241 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 PLAC1Q9HBJ0 212 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 XAB2Q9HCS7 855 aaKnown RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 SLC7A8Q9UHI5 535 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 ZNF214Q9UL59 606 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 PHIPQ8WWQ0 1821 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 H3BRJ5 948 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 GCATO75600 419 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 ERBB2P04626 1255 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 MLNP12872 115 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 GPD1P21695 349 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 PSMC4P43686 418 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 BACE1P56817 501 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 CHI3L2Q15782 390 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 INSCQ1MX18 579 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 SMTNL2Q2TAL5 461 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 KCNT1Q5JUK3 1230 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 FAM160B1Q5W0V3 765 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 TSHZ1Q6ZSZ6 1077 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 ARID3BQ8IVW6 561 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 WDR75Q8IWA0 830 aaKnown RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 PLD5Q8N7P1 536 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 DTX3LQ8TDB6 740 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 FAM172AQ8WUF8 416 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 STON2Q8WXE9 905 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 ACAP3Q96P50 834 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 CPXM1Q96SM3 734 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 EBNA1BP2Q99848 306 aaKnown RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 ACAD9Q9H845 621 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 AS3MTQ9HBK9 375 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 S100A14Q9HCY8 104 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 PTPRHQ9HD43 1115 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 METTL5Q9NRN9 209 aaKnown RBP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 RAB6BQ9NRW1 208 aa15.79■□□□□ 0.12
C9orf3-204ENST00000424143 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.79■□□□□ 0.12
C9orf3-204ENST00000424143 BRWD3Q6RI45 1802 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 A0A088AWK7 358 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 SLC15A5A6NIM6 579 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 C2CD4BA6NLJ0 364 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 AP1G1O43747 822 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 ALDH1A2O94788 518 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 ENO1P06733 434 aaKnown RBP15.78■□□□□ 0.12
C9orf3-204ENST00000424143 VDRP11473 427 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 GRK2P25098 689 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 L1CAMP32004 1257 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 CDK7P50613 346 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 AQP5P55064 265 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 PTPN11Q06124 597 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-204ENST00000424143 GRM2Q14416 872 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 STILQ15468 1287 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 STXBP2Q15833 593 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 PDCD2Q16342 344 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-204ENST00000424143 MAP3K21Q5TCX8 1036 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 RNF220Q5VTB9 566 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 FOXB2Q5VYV0 432 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 SNRNP48Q6IEG0 339 aaKnown RBP15.78■□□□□ 0.12
C9orf3-204ENST00000424143 CCNJLQ8IV13 435 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 CDKL3Q8IVW4 592 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-204ENST00000424143 ZBTB8OSQ8IWT0 167 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 STKLD1Q8NE28 680 aa15.78■□□□□ 0.12
C9orf3-204ENST00000424143 SIGLEC10Q96LC7 697 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms