RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 SMARCE1Q969G3 411 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 CDK5RAP1Q96SZ6 601 aaKnown RBP19.43■□□□□ 0.7
VPS16-204ENST00000417508 ARRDC1-AS1Q9H2J1 176 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 DEC1Q9P2X7 70 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 LSM7Q9UK45 103 aaKnown RBP19.43■□□□□ 0.7
VPS16-204ENST00000417508 COQ4Q9Y3A0 265 aa19.43■□□□□ 0.7
VPS16-204ENST00000417508 SCAMP3O14828 347 aaKnown RBP19.42■□□□□ 0.7
VPS16-204ENST00000417508 ALDH1A2O94788 518 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 PPP1R2P41236 205 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 EOGTQ5NDL2 527 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 PPP1R26Q5T8A7 1209 aaPredicted RBP19.42■□□□□ 0.7
VPS16-204ENST00000417508 CCDC186Q7Z3E2 898 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 RASSF3Q86WH2 238 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 ETFBKMTQ8IXQ9 262 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 TMEM176AQ96HP8 235 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 CNOT6LQ96LI5 555 aaKnown RBP19.42■□□□□ 0.7
VPS16-204ENST00000417508 CISHQ9NSE2 258 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 CLIC5Q9NZA1 410 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 WDR35Q9P2L0 1181 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 DNMT3LQ9UJW3 386 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 USP3Q9Y6I4 520 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 ABCA7Q8IZY2 2146 aa19.42■□□□□ 0.7
VPS16-204ENST00000417508 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.41■□□□□ 0.7
VPS16-204ENST00000417508 TBC1D3BA6NDS4 549 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 TBX18O95935 607 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 RALAP11233 206 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 KIR2DL1P43626 348 aaPredicted RBP19.41■□□□□ 0.7
VPS16-204ENST00000417508 PGFP49763 221 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 SLC8A3P57103 927 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 STIM1Q13586 685 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 PLA2G2CQ5R387 149 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 ANKRD40Q6AI12 368 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 GPRIN1Q7Z2K8 1008 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 C12orf40Q86WS4 652 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 CCDC33Q8N5R6 958 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 IL17RCQ8NAC3 791 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 EEF2KMTQ96G04 330 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 DUSP15Q9H1R2 295 aaPredicted RBP19.41■□□□□ 0.7
VPS16-204ENST00000417508 POLMQ9NP87 494 aaPredicted RBP19.41■□□□□ 0.7
VPS16-204ENST00000417508 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.41■□□□□ 0.7
VPS16-204ENST00000417508 CNOT1A5YKK6 2376 aaKnown RBP19.41■□□□□ 0.7
VPS16-204ENST00000417508 NCOR2Q9Y618 2525 aa19.41■□□□□ 0.7
VPS16-204ENST00000417508 MED19A0JLT2 244 aaPredicted RBP19.4■□□□□ 0.7
VPS16-204ENST00000417508 CYP26A1O43174 497 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 GREM1O60565 184 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 TULP3O75386 442 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 RARGP13631 454 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 LIMK1P53667 647 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 RAD23BP54727 409 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 YWHAEP62258 255 aaKnown RBP19.4■□□□□ 0.7
VPS16-204ENST00000417508 ANO4Q32M45 955 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 ZNF394Q53GI3 561 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 TCERG1LQ5VWI1 586 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 ARHGAP17Q68EM7 881 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 TRMT11Q7Z4G4 463 aaKnown RBP19.4■□□□□ 0.7
VPS16-204ENST00000417508 TMEM25Q86YD3 366 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 ARHGAP18Q8N392 663 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 PHTF2Q8N3S3 785 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 C12orf50Q8NA57 414 aaPredicted RBP19.4■□□□□ 0.7
VPS16-204ENST00000417508 SLC4A11Q8NBS3 891 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 DDX1Q92499 740 aaKnown RBP19.4■□□□□ 0.7
VPS16-204ENST00000417508 DHTKD1Q96HY7 919 aaPredicted RBP19.4■□□□□ 0.7
VPS16-204ENST00000417508 XPO6Q96QU8 1125 aaKnown RBP19.4■□□□□ 0.7
VPS16-204ENST00000417508 METTL14Q9HCE5 456 aaKnown RBP19.4■□□□□ 0.7
VPS16-204ENST00000417508 VPS45Q9NRW7 570 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 OSER1Q9NX31 292 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 ARMCX3Q9UH62 379 aaPredicted RBP19.4■□□□□ 0.7
VPS16-204ENST00000417508 ZNF510Q9Y2H8 683 aa19.4■□□□□ 0.7
VPS16-204ENST00000417508 A0A1W2PQH9 124 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 PSMA7O14818 248 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 KLF8O95600 359 aaPredicted RBP19.39■□□□□ 0.69
VPS16-204ENST00000417508 IRF1P10914 325 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 TIE1P35590 1138 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 COG7P83436 770 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 BYSLQ13895 437 aaKnown RBP19.39■□□□□ 0.69
VPS16-204ENST00000417508 C10orf120Q5SQS8 335 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 ALLCQ8N6M5 410 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 ANKRD52Q8NB46 1076 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 TXNDC5Q8NBS9 432 aaKnown RBP19.39■□□□□ 0.69
VPS16-204ENST00000417508 TATDN2Q93075 761 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 JAKMIP2Q96AA8 810 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 NMUR1Q9HB89 426 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 MARK1Q9P0L2 795 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 NAGPAQ9UK23 515 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 STARD13Q9Y3M8 1113 aa19.39■□□□□ 0.69
VPS16-204ENST00000417508 DCDC2BA2VCK2 349 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 PMM2O15305 246 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 CHRM1P11229 460 aaPredicted RBP19.38■□□□□ 0.69
VPS16-204ENST00000417508 KDSRQ06136 332 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 MESP2Q0VG99 397 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 AASDHQ4L235 1098 aaPredicted RBP19.38■□□□□ 0.69
VPS16-204ENST00000417508 DCAF17Q5H9S7 520 aaPredicted RBP19.38■□□□□ 0.69
VPS16-204ENST00000417508 EMC10Q5UCC4 262 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 ANO7Q6IWH7 933 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 TMEM92Q6UXU6 159 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 THADAQ6YHU6 1953 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 SCD5Q86SK9 330 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 NAT16Q8N8M0 369 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 TERB1Q8NA31 727 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 WBP2Q969T9 261 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms