RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ARHGAP33O14559 1287 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 CLIC2O15247 247 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 ZNF217O75362 1048 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 CYP2J2P51589 502 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 CDH8P55286 799 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 GFPT1Q06210 699 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-210ENST00000413578 RING1Q06587 406 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 LRSAM1Q6UWE0 723 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 RAB44Q7Z6P3 723 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-210ENST00000413578 HDDC3Q8N4P3 179 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 MINDY1Q8N5J2 469 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 OR2I1PQ8NGU4 316 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-210ENST00000413578 P2RY11Q96G91 374 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 SMARCD1Q96GM5 515 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 ZNF419Q96HQ0 510 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-210ENST00000413578 C7orf25Q9BPX7 421 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 KLF16Q9BXK1 252 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-210ENST00000413578 LRRC27Q9C0I9 530 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 CSNK1G1Q9HCP0 422 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 CD93Q9NPY3 652 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 NXF1Q9UBU9 619 aaKnown RBP12.88□□□□□ -0.35
LIMS2-210ENST00000413578 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
LIMS2-210ENST00000413578 TLR5O60602 858 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 OPHN1O60890 802 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 AP1G2O75843 785 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 BEST1O76090 585 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 VNN1O95497 513 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 CISD3P0C7P0 127 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 PI4KAP42356 2102 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 WASP42768 502 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 CASP4P49662 377 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 ATXN3P54252 364 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-210ENST00000413578 ASIC1P78348 528 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 SLC14A1Q13336 389 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 TRPC3Q13507 836 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 HNRNPDQ14103 355 aaKnown RBP12.87□□□□□ -0.35
LIMS2-210ENST00000413578 ANO4Q32M45 955 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 GRAMD4Q6IC98 578 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 UNC13DQ70J99 1090 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 CHCHD4Q8N4Q1 142 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 DEFB119Q8N690 84 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 IPO4Q8TEX9 1081 aaKnown RBP12.87□□□□□ -0.35
LIMS2-210ENST00000413578 GTPBP2Q9BX10 602 aaKnown RBP12.87□□□□□ -0.35
LIMS2-210ENST00000413578 CYLDQ9NQC7 956 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 KRT82Q9NSB4 513 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 DNAJC17Q9NVM6 304 aaKnown RBP12.87□□□□□ -0.35
LIMS2-210ENST00000413578 OSER1Q9NX31 292 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
LIMS2-210ENST00000413578 FBXO10Q9UK96 956 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 CYP8B1Q9UNU6 501 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 MYOFQ9NZM1 2061 aa12.87□□□□□ -0.35
LIMS2-210ENST00000413578 ITPR1Q14643 2758 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 MYO18AQ92614 2054 aaKnown RBP12.86□□□□□ -0.35
LIMS2-210ENST00000413578 LRRIQ3A6PVS8 624 aaPredicted RBP12.86□□□□□ -0.35
LIMS2-210ENST00000413578 GFRA2O00451 464 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 TBX18O95935 607 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 C4BPAP04003 597 aaKnown RBP12.86□□□□□ -0.35
LIMS2-210ENST00000413578 AMPD3Q01432 767 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 ZNF423Q2M1K9 1284 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 Q6ZNB5 142 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 TOGARAM2Q6ZUX3 1019 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 NUDT18Q6ZVK8 323 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 PROSER1Q86XN7 944 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 NELFCDQ8IXH7 590 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 CRYBG2Q8N1P7 616 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 TMEM174Q8WUU8 243 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 TNIP3Q96KP6 325 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 MRGPRX1Q96LB2 322 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 HSPA12BQ96MM6 686 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 ZSCAN16Q9H4T2 348 aaPredicted RBP12.86□□□□□ -0.35
LIMS2-210ENST00000413578 UPF2Q9HAU5 1272 aaKnown RBP12.86□□□□□ -0.35
LIMS2-210ENST00000413578 HMGXB4Q9UGU5 601 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
LIMS2-210ENST00000413578 HHLA1C9JL84 531 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 NEDD8-MDP1E9PL57 170 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 PPP6R2O75170 966 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 IRF1P10914 325 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 CCDC130P13994 396 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 TYRP14679 529 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 NCOA4Q13772 614 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 ENPP2Q13822 863 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 ZNF667Q5HYK9 610 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 KLHDC10Q6PID8 442 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 GPRIN1Q7Z2K8 1008 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 ACOT1Q86TX2 421 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 METTL3Q86U44 580 aaKnown RBP12.85□□□□□ -0.35
LIMS2-210ENST00000413578 CHPFQ8IZ52 775 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 SLC2A14Q8TDB8 520 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 ELMO3Q96BJ8 720 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 DHX58Q96C10 678 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 INTS4Q96HW7 963 aaKnown RBP12.85□□□□□ -0.35
LIMS2-210ENST00000413578 CAMK1GQ96NX5 476 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 MED10Q9BTT4 135 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 BBS2Q9BXC9 721 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 SLC6A17Q9H1V8 727 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms