RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CD248Q9HCU0 757 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 CCDC177Q9NQR7 707 aaPredicted RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 CHORDC1Q9UHD1 332 aaPredicted RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 SLC23A1Q9UHI7 598 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 CNOT7Q9UIV1 285 aaKnown RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 CNOT11Q9UKZ1 510 aaKnown RBP5.39□□□□□ -1.55
LSM5-205ENST00000409952 LYVE1Q9Y5Y7 322 aa5.39□□□□□ -1.55
LSM5-205ENST00000409952 PNMA6EA0A0J9YXQ4 647 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 TCRBV7S2A1N4TA0A589 114 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 MROH6A6NGR9 719 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 FAM90A20PA6NIJ5 464 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 PTGES3LE9PB15 166 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 GUCY1B2O75343 617 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 PIAS2O75928 621 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 HAUS5O94927 633 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 ARP10275 920 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 ATP5JP18859 108 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 EPHA8P29322 1005 aaPredicted RBP5.38□□□□□ -1.55
LSM5-205ENST00000409952 GGT5P36269 586 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 TNNT3P45378 269 aaPredicted RBP5.38□□□□□ -1.55
LSM5-205ENST00000409952 RPS3AP61247 264 aaKnown RBP5.38□□□□□ -1.55
LSM5-205ENST00000409952 PTH1RQ03431 593 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 KIAA2012Q0VF49 1180 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 LRMPQ12912 555 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 STK4Q13043 487 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 PPP2R5CQ13362 524 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 CAMK1Q14012 370 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 EIF4HQ15056 248 aaKnown RBP5.38□□□□□ -1.55
LSM5-205ENST00000409952 LRCH2Q5VUJ6 765 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 PLBD1Q6P4A8 553 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 RASGRP2Q7LDG7 609 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 TTC30AQ86WT1 665 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 TAGAPQ8N103 731 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 PLA2G15Q8NCC3 412 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 FAM46DQ8NEK8 389 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 ETNPPLQ8TBG4 499 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 METTL6Q8TCB7 284 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 KTI12Q96EK9 354 aaPredicted RBP5.38□□□□□ -1.55
LSM5-205ENST00000409952 HIC2Q96JB3 615 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 ZSWIM3Q96MP5 696 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 JAKMIP1Q96N16 626 aaKnown RBP5.38□□□□□ -1.55
LSM5-205ENST00000409952 EYA3Q99504 573 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 MESP1Q9BRJ9 268 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 EDEM3Q9BZQ6 932 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 KATNBL1Q9H079 304 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 GRPEL1Q9HAV7 217 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 TMLHEQ9NVH6 421 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 CDC42EP3Q9UKI2 254 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 NFU1Q9UMS0 254 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 SLC45A2Q9UMX9 530 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 AGAP1Q9UPQ3 857 aa5.38□□□□□ -1.55
LSM5-205ENST00000409952 TSPAN4O14817 238 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 FYB1O15117 783 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 DHHO43323 396 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 RPP40O75818 363 aaKnown RBP5.37□□□□□ -1.55
LSM5-205ENST00000409952 CCNDBP1O95273 360 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 PTMAP06454 111 aaKnown RBP5.37□□□□□ -1.55
LSM5-205ENST00000409952 UBL4AP11441 157 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 SCG2P13521 617 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 ATP6V1B1P15313 513 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 PSMA3P25788 255 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 TM4SF1P30408 202 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 ABCD1P33897 745 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 PSMB10P40306 273 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 HADHAP40939 763 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 RGS2P41220 211 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 KIR2DL3P43628 341 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 TCF15Q12870 199 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 NFIL3Q16649 462 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 TMEM266Q2M3C6 531 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 ZNF750Q32MQ0 723 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 NRN1LQ496H8 165 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 ZNF484Q5JVG2 852 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 MFSD14BQ5SR56 506 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 MANEALQ5VSG8 457 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 CACHD1Q5VU97 1274 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 LIPMQ5VYY2 423 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 ABLIM2Q6H8Q1 611 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 FAM47EQ6ZV65 393 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 CEP57L1Q8IYX8 460 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 AVL9Q8NBF6 648 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 LCORQ96JN0 433 aaPredicted RBP5.37□□□□□ -1.55
LSM5-205ENST00000409952 NCAPGQ9BPX3 1015 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 MRI1Q9BV20 369 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 SLC25A18Q9H1K4 315 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 BARX1Q9HBU1 254 aaPredicted RBP5.37□□□□□ -1.55
LSM5-205ENST00000409952 FSCN3Q9NQT6 498 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 FBXO34Q9NWN3 711 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 DNMT3BQ9UBC3 853 aaKnown RBP5.37□□□□□ -1.55
LSM5-205ENST00000409952 MORF4L1Q9UBU8 362 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 HESX1Q9UBX0 185 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 CLCA2Q9UQC9 943 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 CDY1Q9Y6F8 540 aa5.37□□□□□ -1.55
LSM5-205ENST00000409952 PEX12O00623 359 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 UBE2CO00762 179 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 NRP1O14786 923 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 TNPO2O14787 897 aaKnown RBP5.36□□□□□ -1.55
LSM5-205ENST00000409952 SEPT4O43236 478 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 B4GALT3O60512 393 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 TAF5LO75529 589 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms