RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 NCKAP1LP55160 1127 aa25.86■■□□□ 1.73
SPIRE1-202ENST00000409402 PLCL1Q15111 1095 aa25.86■■□□□ 1.73
SPIRE1-202ENST00000409402 ADAM2Q99965 735 aa25.86■■□□□ 1.73
SPIRE1-202ENST00000409402 DYRK3O43781 588 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 GLP2RO95838 553 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 CNTN1Q12860 1018 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 SLC29A2Q14542 456 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 CLEC4FQ8N1N0 589 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 ZCCHC17Q9NP64 241 aaKnown RBP25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 TFR2Q9UP52 801 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 RUVBL2Q9Y230 463 aaKnown RBP25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 HORMAD1Q86X24 394 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 SLC20A1Q8WUM9 679 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 TATDN2Q93075 761 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 SERPINB12Q96P63 405 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 GGT7Q9UJ14 662 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 HNRNPRO43390 633 aaKnown RBP25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 RAMP2O60895 175 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 TRIM16O95361 564 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 NUMBP49757 651 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 MARC1Q5VT66 337 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 BRSK2Q8IWQ3 736 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 FRMPD4Q14CM0 1322 aa25.85■■□□□ 1.73
SPIRE1-202ENST00000409402 MLNP12872 115 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 MAPK1P28482 360 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 SP3Q02447 781 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 CSGALNACT1Q8TDX6 532 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 IGFLR1Q9H665 355 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 FAM198AQ9UFP1 575 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 TRIM66O15016 1216 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 CELF3Q5SZQ8 465 aaKnown RBP25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 C15orf52Q6ZUT6 534 aaKnown RBP25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 ZFP42Q96MM3 310 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 CAPN10Q9HC96 672 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 NRCAMQ92823 1304 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 ADNPQ9H2P0 1102 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 OSGEPL1Q9H4B0 414 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 MAN1C1Q9NR34 630 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 A0A0A6YYK5 440 aaPredicted RBP25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 SGCGQ13326 291 aa25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 ILKAPQ9H0C8 392 aaPredicted RBP25.84■■□□□ 1.73
SPIRE1-202ENST00000409402 MROH7Q68CQ1 1323 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 NCF1BA6NI72 391 aaPredicted RBP25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 NCF1CA8MVU1 366 aaPredicted RBP25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 NCF1P14598 390 aaPredicted RBP25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 SLC39A12Q504Y0 691 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 FAR2Q96K12 515 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 NDEL1Q9GZM8 345 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 SYTL2Q9HCH5 934 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 CYP3A4P08684 503 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 TSPAN3O60637 253 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 ZNF268Q14587 947 aaPredicted RBP25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 TMEM119Q4V9L6 283 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 WDR48Q8TAF3 677 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 ERVK-10P10266 1014 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 YWHAZP63104 245 aaKnown RBP25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 RGMBQ6NW40 437 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 TMEM86AQ8N2M4 240 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 ZFYVE19Q96K21 471 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 RBM22Q9NW64 420 aaKnown RBP eCLIP25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 SMPD4Q9NXE4 827 aa25.83■■□□□ 1.73
SPIRE1-202ENST00000409402 MICAL2O94851 1124 aa25.83■■□□□ 1.72
SPIRE1-202ENST00000409402 TMEM199Q8N511 208 aa25.83■■□□□ 1.72
SPIRE1-202ENST00000409402 LPCAT1Q8NF37 534 aa25.83■■□□□ 1.72
SPIRE1-202ENST00000409402 KAT2BQ92831 832 aa25.83■■□□□ 1.72
SPIRE1-202ENST00000409402 ATP13A1Q9HD20 1204 aa25.83■■□□□ 1.72
SPIRE1-202ENST00000409402 IFRD1O00458 451 aaPredicted RBP25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 SERPINF2P08697 491 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 UBA1P22314 1058 aaKnown RBP25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 CHADLQ6NUI6 762 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 ZNF438Q7Z4V0 828 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 WHRNQ9P202 907 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 GAKO14976 1311 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 IRF6O14896 467 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 TBC1D4O60343 1298 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 OR1E1P30953 314 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 ZNF513Q8N8E2 541 aaPredicted RBP25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 JADE3Q92613 823 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 PDGFDQ9GZP0 370 aaPredicted RBP25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 PRIM2P49643 509 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 ILDR2Q71H61 639 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 ZNF473Q8WTR7 871 aaKnown RBP25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 MYCBPQ99417 103 aaPredicted RBP25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 PACSIN1Q9BY11 444 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 IL1RL2Q9HB29 575 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 MSRAQ9UJ68 235 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 F8W810 466 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 ZNF333Q96JL9 665 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 TBCBQ99426 244 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 APOL2Q9BQE5 337 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 FBXL21Q9UKT6 434 aa25.82■■□□□ 1.72
SPIRE1-202ENST00000409402 PLA2G6O60733 806 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 SEC24DO94855 1032 aaPredicted RBP25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 PDHA1P08559 390 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 PAEPP09466 180 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 CACNA2D2Q9NY47 1150 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 DAB2P98082 770 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 DSG4Q86SJ6 1040 aa25.81■■□□□ 1.72
SPIRE1-202ENST00000409402 PARP9Q8IXQ6 854 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms