RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 TCEA3O75764 348 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 RECQL4O94761 1208 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 ANP32DO95626 131 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 MTHFD1LQ6UB35 978 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 NIPA2Q8N8Q9 360 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 MICAL1Q8TDZ2 1067 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 FAM167BQ9BTA0 163 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 MRPL42Q9Y6G3 142 aaKnown RBP12.35□□□□□ -0.43
PCNX4-204ENST00000406949 PHIPQ8WWQ0 1821 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 SNRPAP09012 282 aaKnown RBP12.35□□□□□ -0.43
PCNX4-204ENST00000406949 EPHB2P29323 1055 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 GBE1Q04446 702 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 DGKDQ16760 1214 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 APPL2Q8NEU8 664 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 SLC2A14Q8TDB8 520 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 NUDCD1Q96RS6 583 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 MECRQ9BV79 373 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 EIF2AQ9BY44 585 aaKnown RBP12.35□□□□□ -0.43
PCNX4-204ENST00000406949 EVPLQ92817 2033 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 FAM189A1O60320 539 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 TSPAN1O60635 241 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 EDF1O60869 148 aaKnown RBP12.34□□□□□ -0.43
PCNX4-204ENST00000406949 EPHX2P34913 555 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 SLC6A3Q01959 620 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 ARHGAP1Q07960 439 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 PPIL2Q13356 520 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 NOMO1Q15155 1222 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 ACCSLQ4AC99 568 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 EFHC2Q5JST6 749 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 NOTUMQ6P988 496 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 KCNT2Q6UVM3 1135 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 IGDCC3Q8IVU1 814 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 ARID3BQ8IVW6 561 aaPredicted RBP12.34□□□□□ -0.43
PCNX4-204ENST00000406949 PLD5Q8N7P1 536 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 NAT8LQ8N9F0 302 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 ADAM32Q8TC27 787 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 FNIP1Q8TF40 1166 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 DNAJB3Q8WWF6 145 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 ALKBH8Q96BT7 664 aaKnown RBP12.34□□□□□ -0.43
PCNX4-204ENST00000406949 PGBD4Q96DM1 585 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 FRMD8P1Q9BZ68 369 aaPredicted RBP12.34□□□□□ -0.43
PCNX4-204ENST00000406949 PPCSQ9HAB8 311 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 KLHL8Q9P2G9 620 aaPredicted RBP12.34□□□□□ -0.43
PCNX4-204ENST00000406949 SH3BP1Q9Y3L3 701 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 C2CD4BA6NLJ0 364 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 CDC25CP30307 473 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 BNIP1Q12981 228 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 PDK2Q15119 407 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 STILQ15468 1287 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 TAF11Q15544 211 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 PID1Q7Z2X4 250 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 TTC39CQ8N584 583 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 PDCD7Q8N8D1 485 aaKnown RBP12.34□□□□□ -0.43
PCNX4-204ENST00000406949 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 CDKL2Q92772 493 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 ATP2A3Q93084 1043 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 LENG1Q96BZ8 264 aaPredicted RBP12.34□□□□□ -0.43
PCNX4-204ENST00000406949 BCO2Q9BYV7 579 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 PCDH18Q9HCL0 1135 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 ARMCX1Q9P291 453 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 SUFUQ9UMX1 484 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 STARD13Q9Y3M8 1113 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 XPOTO43592 962 aaKnown RBP12.34□□□□□ -0.43
PCNX4-204ENST00000406949 UNC5CO95185 931 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 CHI3L2Q15782 390 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 KYAT1Q16773 422 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 CCDC14Q49A88 953 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 CES3Q6UWW8 571 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 SLC26A11Q86WA9 606 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 MCRS1Q96EZ8 462 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 SRPK1Q96SB4 655 aaKnown RBP12.34□□□□□ -0.43
PCNX4-204ENST00000406949 MAGEB5Q9BZ81 275 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 VPS11Q9H270 941 aa12.34□□□□□ -0.43
PCNX4-204ENST00000406949 CTSHP09668 335 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 MYL2P10916 166 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 KDSRQ06136 332 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 CFAP157Q5JU67 520 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 FBXO47Q5MNV8 452 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 TTC39BQ5VTQ0 682 aaPredicted RBP12.33□□□□□ -0.43
PCNX4-204ENST00000406949 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 ZCCHC23Q6ZST2 131 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 ZNF354CQ86Y25 554 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 UBR7Q8N806 425 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 CMASQ8NFW8 434 aaPredicted RBP12.33□□□□□ -0.43
PCNX4-204ENST00000406949 RFWD2Q8NHY2 731 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 PTPRHQ9HD43 1115 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 FBXO6Q9NRD1 293 aaPredicted RBP12.33□□□□□ -0.43
PCNX4-204ENST00000406949 ETNK2Q9NVF9 386 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 CHKBQ9Y259 395 aa12.33□□□□□ -0.43
PCNX4-204ENST00000406949 TIMM13Q9Y5L4 95 aaPredicted RBP12.33□□□□□ -0.43
PCNX4-204ENST00000406949 IGKV6-21A0A0C4DH24 114 aa12.33□□□□□ -0.44
PCNX4-204ENST00000406949 PRPF4O43172 522 aaKnown RBP eCLIP12.33□□□□□ -0.44
PCNX4-204ENST00000406949 CNMDO75829 334 aa12.33□□□□□ -0.44
PCNX4-204ENST00000406949 ATP5HO75947 161 aa12.33□□□□□ -0.44
PCNX4-204ENST00000406949 ENO1P06733 434 aaKnown RBP12.33□□□□□ -0.44
PCNX4-204ENST00000406949 TFE3P19532 575 aaPredicted RBP12.33□□□□□ -0.44
PCNX4-204ENST00000406949 SERPINB3P29508 390 aa12.33□□□□□ -0.44
PCNX4-204ENST00000406949 CDH5P33151 784 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms