RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 LCA5LO95447 670 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 FGF19O95750 216 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 OAS1P00973 400 aaKnown RBP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 LTFP02788 710 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 SNX16P57768 344 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 YWHAZP63104 245 aaKnown RBP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 ZXDBP98169 803 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 PUS10Q3MIT2 529 aaKnown RBP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 GPR158Q5T848 1215 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 SYPL2Q5VXT5 272 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 ZDHHC17Q8IUH5 632 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 ST13P5Q8NFI4 369 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 MRPS31Q92665 395 aaKnown RBP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 FAM149B1Q96BN6 582 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 THAP2Q9H0W7 228 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 CLIC5Q9NZA1 410 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 TMEM59LQ9UK28 342 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 NAALADL1Q9UQQ1 740 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 GOLGA8SH3BPF8 625 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 ATMINO43313 823 aaPredicted RBP16.7■□□□□ 0.26
HMGA1-204ENST00000401473 TLR5O60602 858 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 NDUFA10O95299 355 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 CALB1P05937 261 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 RARGP13631 454 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 ABCB4P21439 1286 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 GALCP54803 685 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
HMGA1-204ENST00000401473 RNASE9P60153 205 aaKnown RBP16.7■□□□□ 0.26
HMGA1-204ENST00000401473 FAM102AQ5T9C2 384 aaPredicted RBP16.7■□□□□ 0.26
HMGA1-204ENST00000401473 TRNP1Q6NT89 227 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 SLC26A9Q7LBE3 791 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 ARL14EPQ8N8R7 260 aaPredicted RBP16.7■□□□□ 0.26
HMGA1-204ENST00000401473 MSANTD4Q8NCY6 345 aa16.7■□□□□ 0.26
HMGA1-204ENST00000401473 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.7■□□□□ 0.269e-9■■■□□ 17.2
HMGA1-204ENST00000401473 COCHO43405 550 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 HDCP19113 662 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 PSEN1P49768 467 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 CCZ1BP86790 482 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 CCZ1P86791 482 aaPredicted RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 EFHC1Q5JVL4 640 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 HECTD3Q5T447 861 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 ZNF830Q96NB3 372 aaPredicted RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 GCNAQ96QF7 691 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 PPP1R9BQ96SB3 815 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 PHF7Q9BWX1 381 aaPredicted RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 SMG9Q9H0W8 520 aaKnown RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 TASP1Q9H6P5 420 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 POPDC2Q9HBU9 364 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 TRPC7Q9HCX4 862 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 ABCC13Q9NSE7 274 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 CDH7Q9ULB5 785 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 STRIP2Q9ULQ0 834 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 REXO2Q9Y3B8 237 aaKnown RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 EIF3CLB5ME19 914 aaKnown RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 MDM4O15151 490 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 SART1O43290 800 aaKnown RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 OLFM2O95897 454 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 NCAM1P13591 858 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 RPL7AP62424 266 aaKnown RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 PITX1P78337 314 aaPredicted RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 MAMLD1Q13495 774 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 PPP1R15BQ5SWA1 713 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 BTBD8Q5XKL5 378 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 PLEKHA7Q6IQ23 1121 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 TOGARAM2Q6ZUX3 1019 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 CMTM8Q8IZV2 173 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 ARHGAP18Q8N392 663 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 ZNF276Q8N554 614 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 C3orf20Q8ND61 904 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 JOSD2Q8TAC2 188 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 EIF3CQ99613 913 aaKnown RBP16.69■□□□□ 0.26
HMGA1-204ENST00000401473 ADAM33Q9BZ11 813 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 SLITRK6Q9H5Y7 841 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 WDR35Q9P2L0 1181 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 TFR2Q9UP52 801 aa16.69■□□□□ 0.26
HMGA1-204ENST00000401473 ANKRD62A6NC57 917 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 SLC34A2O95436 690 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 GLI1P08151 1106 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 LAMP2P13473 410 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 RFC1P35251 1148 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-204ENST00000401473 CYLC1P35663 651 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-204ENST00000401473 FLT3P36888 993 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 TUBP50607 506 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 DCAF6Q58WW2 860 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 PPP1R2P3Q6NXS1 205 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 ARID3BQ8IVW6 561 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-204ENST00000401473 DEFB106AQ8N104 65 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 EMC1Q8N766 993 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 ARHGEF26Q96DR7 871 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 RPGRIP1Q96KN7 1286 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 SLC2A13Q96QE2 648 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 METTL5Q9NRN9 209 aaKnown RBP16.68■□□□□ 0.26
HMGA1-204ENST00000401473 ASNSD1Q9NWL6 643 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 GDE1Q9NZC3 331 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 CNOT8Q9UFF9 292 aaKnown RBP16.68■□□□□ 0.26
HMGA1-204ENST00000401473 CCL26Q9Y258 94 aa16.68■□□□□ 0.26
HMGA1-204ENST00000401473 SIGLEC16A6NMB1 481 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 HSF2BPO75031 334 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 KRT3P12035 628 aa16.67■□□□□ 0.26
HMGA1-204ENST00000401473 TFE3P19532 575 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms