RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 CACNG3O60359 315 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 AP1G2O75843 785 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 TBX18O95935 607 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 CISD3P0C7P0 127 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 MAPK8P45983 427 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 ZNF33AQ06730 810 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 CUL4BQ13620 913 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 ANO4Q32M45 955 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 C10orf76Q5T2E6 689 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 ARMCX6Q7L4S7 300 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 UNC93AQ86WB7 457 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 ZNF276Q8N554 614 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 GOLGA5Q8TBA6 731 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 ELMO3Q96BJ8 720 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 ZNF419Q96HQ0 510 aaPredicted RBP12.62□□□□□ -0.39
SYNE4-203ENST00000397428 ACOX2Q99424 681 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 GABRG3Q99928 467 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 BLZF1Q9H2G9 400 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 CYLDQ9NQC7 956 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 TLR8Q9NR97 1041 aaKnown RBP12.62□□□□□ -0.39
SYNE4-203ENST00000397428 MARK1Q9P0L2 795 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 FBXO10Q9UK96 956 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
SYNE4-203ENST00000397428 NEUROG3Q9Y4Z2 214 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 CEP192Q8TEP8 1941 aa12.62□□□□□ -0.39
SYNE4-203ENST00000397428 DMXL2Q8TDJ6 3036 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 IGHV1OR15-9A0A0B4J2B8 117 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 PRRT4C9JH25 899 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 HHLA1C9JL84 531 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 IKBKBO14920 756 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 KLRC4O43908 158 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 TLR5O60602 858 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 ZNF217O75362 1048 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 HOXB2P14652 356 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 ATP5C1P36542 298 aaKnown RBP12.61□□□□□ -0.39
SYNE4-203ENST00000397428 NDST1P52848 882 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 DLG4P78352 724 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 RPL6Q02878 288 aaKnown RBP12.61□□□□□ -0.39
SYNE4-203ENST00000397428 GFPT1Q06210 699 aaPredicted RBP12.61□□□□□ -0.39
SYNE4-203ENST00000397428 BIRC3Q13489 604 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 ZNF699Q32M78 642 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 ZACNQ401N2 412 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 GRAMD4Q6IC98 578 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 SDE2Q6IQ49 451 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 KIAA1211LQ6NV74 962 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 KLHDC10Q6PID8 442 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 SLC41A1Q8IVJ1 513 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 DEFB119Q8N690 84 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 SLC2A14Q8TDB8 520 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 TMC2Q8TDI7 906 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 IPO4Q8TEX9 1081 aaKnown RBP12.61□□□□□ -0.39
SYNE4-203ENST00000397428 TAF4BQ92750 862 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 HNRNPABQ99729 332 aaKnown RBP12.61□□□□□ -0.39
SYNE4-203ENST00000397428 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 OSER1Q9NX31 292 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 CALCOCO1Q9P1Z2 691 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 SCML2Q9UQR0 700 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 MSRB2Q9Y3D2 182 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 MYO18AQ92614 2054 aaKnown RBP12.61□□□□□ -0.39
SYNE4-203ENST00000397428 NBEAQ8NFP9 2946 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 PCNX2A6NKB5 2137 aa12.61□□□□□ -0.39
SYNE4-203ENST00000397428 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
SYNE4-203ENST00000397428 SPAARA0A1B0GVQ0 90 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 A0A1W2PQD8 194 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 SRRM3A6NNA2 597 aaPredicted RBP12.6□□□□□ -0.39
SYNE4-203ENST00000397428 GFRA2O00451 464 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 ARHGAP33O14559 1287 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 ASS1P00966 412 aaKnown RBP12.6□□□□□ -0.39
SYNE4-203ENST00000397428 CAPNS1P04632 268 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 CFIP05156 583 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 CD59P13987 128 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 CCDC130P13994 396 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 TYRP14679 529 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 WASP42768 502 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 PLA2G4AP47712 749 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 MAP3K7CLP57077 242 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 STK4Q13043 487 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 C1orf220Q5T0J3 134 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 EGFLAMQ63HQ2 1017 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 SV2AQ7L0J3 742 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 RABEPKQ7Z6M1 372 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 METTL3Q86U44 580 aaKnown RBP12.6□□□□□ -0.39
SYNE4-203ENST00000397428 C12orf29Q8N999 325 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 XPO6Q96QU8 1125 aaKnown RBP12.6□□□□□ -0.39
SYNE4-203ENST00000397428 BBS2Q9BXC9 721 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 NACA2Q9H009 215 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 KCTD10Q9H3F6 313 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 FSCN3Q9NQT6 498 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 KRT82Q9NSB4 513 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
SYNE4-203ENST00000397428 DNAAF2Q9NVR5 837 aaKnown RBP12.6□□□□□ -0.39
SYNE4-203ENST00000397428 PCDHA7Q9UN72 937 aa12.6□□□□□ -0.39
SYNE4-203ENST00000397428 ADAMTS9Q9P2N4 1935 aa12.59□□□□□ -0.39
SYNE4-203ENST00000397428 K7ELQ4 463 aaPredicted RBP12.59□□□□□ -0.39
SYNE4-203ENST00000397428 PDXKO00764 312 aa12.59□□□□□ -0.39
SYNE4-203ENST00000397428 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
SYNE4-203ENST00000397428 HYAL3O43820 417 aaPredicted RBP12.59□□□□□ -0.39
SYNE4-203ENST00000397428 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
SYNE4-203ENST00000397428 IRF1P10914 325 aa12.59□□□□□ -0.39
SYNE4-203ENST00000397428 P4HA1P13674 534 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms