RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ZC3H12BQ5HYM0 836 aaKnown RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 RNF135Q8IUD6 432 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 VGLL2Q8N8G2 317 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 PRMT1Q99873 361 aaKnown RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 SMYD3Q9H7B4 428 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 IL1RAPL1Q9NZN1 696 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 C15orf38-AP3S2A0A0A6YYH1 394 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 SYF2O95926 243 aaKnown RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 SERPINF2P08697 491 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 TPBGLP0DKB5 382 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 KITP10721 976 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 AVPR1AP37288 418 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 TOB1P50616 345 aaPredicted RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 NCALDP61601 193 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 SKIV2LQ15477 1246 aaKnown RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 PDPK2PQ6A1A2 396 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 TRPM8Q7Z2W7 1104 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 ARPINQ7Z6K5 226 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 HELQQ8TDG4 1101 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 CCT8L2Q96SF2 557 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 SEMA6BQ9H3T3 888 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 POLG2Q9UHN1 485 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 C2CD2Q9Y426 696 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 MYO1CO00159 1063 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 PPM1AP35813 382 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 POU5F1Q01860 360 aaKnown RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 ACVR2BQ13705 512 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 SPDYAQ5MJ70 313 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 TLK2Q86UE8 772 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 MCOLN2Q8IZK6 566 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 PLEKHA8Q96JA3 519 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 ZNF333Q96JL9 665 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 H2AFY2Q9P0M6 372 aaPredicted RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 ZSCAN5CA6NGD5 496 aaPredicted RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 FAM47E-STBD1D6RA91 191 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 GLP2RO95838 553 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 IGSF6O95976 241 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 INSRRP14616 1297 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 CYP2A7P20853 494 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 ACO1P21399 889 aaKnown RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 RAP1GDS1P52306 607 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 MSLNQ13421 630 aaPredicted RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 APOBEC3HQ6NTF7 200 aaKnown RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 ABCC13Q9NSE7 274 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 NCKIPSDQ9NZQ3 722 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 UBIAD1Q9Y5Z9 338 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 PTCH2Q9Y6C5 1203 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 PGAM1P18669 254 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 PKN2Q16513 984 aaKnown RBP16.12■□□□□ 0.17
GNE-202ENST00000396594 SEPT3Q9UH03 358 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 TMEM120BA0PK00 339 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 WNT10BO00744 389 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 ASGR1P07306 291 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 RHOAP61586 193 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 MTF1Q14872 753 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 HABP4Q5JVS0 413 aaKnown RBP16.12■□□□□ 0.17
GNE-202ENST00000396594 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.12■□□□□ 0.17
GNE-202ENST00000396594 FBXO16Q8IX29 292 aaPredicted RBP16.12■□□□□ 0.17
GNE-202ENST00000396594 FAM71DQ8N9W8 422 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 AGAP3Q96P47 875 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 HINFPQ9BQA5 517 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 ASCC2Q9H1I8 757 aaPredicted RBP16.12■□□□□ 0.17
GNE-202ENST00000396594 USP27XA6NNY8 438 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 H3BQF6 201 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 ARHGEF9O43307 516 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 CLCN3P51790 818 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 CAMK2GQ13555 558 aaPredicted RBP16.12■□□□□ 0.17
GNE-202ENST00000396594 CLEC10AQ8IUN9 316 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 PPP1R16AQ96I34 528 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 EFCAB1Q9HAE3 211 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 NMRAL1Q9HBL8 299 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 CYP1A1P04798 512 aaPredicted RBP16.12■□□□□ 0.17
GNE-202ENST00000396594 GSNP06396 782 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 ALOX15P16050 662 aaPredicted RBP16.12■□□□□ 0.17
GNE-202ENST00000396594 COPAP53621 1224 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 CYLC2Q14093 348 aaPredicted RBP16.12■□□□□ 0.17
GNE-202ENST00000396594 SV2AQ7L0J3 742 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 PGBD3Q8N328 593 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 KCNMB3Q9NPA1 279 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 RNF112Q9ULX5 631 aa16.12■□□□□ 0.17
GNE-202ENST00000396594 GUCY1B2O75343 617 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 SGPL1O95470 568 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 KRR1Q13601 381 aaKnown RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 ZBTB41Q5SVQ8 909 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 CELF3Q5SZQ8 465 aaKnown RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 NBPF12Q5TAG4 269 aaPredicted RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 DDI1Q8WTU0 396 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 FAM162AQ96A26 154 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 ZBTB9Q96C00 473 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 APBA2Q99767 749 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 CPNE1Q99829 537 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 EPS8L2Q9H6S3 715 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 XPNPEP3Q9NQH7 507 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 FBXO28Q9NVF7 368 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 PCDHA3Q9Y5H8 950 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 RPS6KL1Q9Y6S9 549 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 A0A088AWK7 358 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 ACADSP16219 412 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 ITGB6P18564 788 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 ZNF10P21506 573 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms