RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 AGMOQ6ZNB7 445 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 B4GALNT4Q76KP1 1039 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 EXOC3L1Q86VI1 746 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 ZBED8Q8IZ13 594 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 PCDH19Q8TAB3 1148 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 KCTD13Q8WZ19 329 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 DHX35Q9H5Z1 703 aaKnown RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 AGO3Q9H9G7 860 aaKnown RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 KRT82Q9NSB4 513 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 EXOC1LA0A1B0GW35 172 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 GOLGA8MH3BSY2 632 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 IL4RP24394 825 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 CYP2F1P24903 491 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 CD52P31358 61 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 RPL9P32969 192 aaKnown RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 CLCNKBP51801 687 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 BASP1P80723 227 aaKnown RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 ADCY1Q08828 1119 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 CLEC20AQ6ZU45 233 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 SIX6OS1Q8N1H7 587 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 ATXN2LQ8WWM7 1075 aaKnown RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 FAM149B1Q96BN6 582 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 VPS37BQ9H9H4 285 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 LRRC4Q9HBW1 653 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 INTS9Q9NV88 658 aaKnown RBP15.57■□□□□ 0.08
CBX3-202ENST00000396386 PADI3Q9ULW8 664 aa15.57■□□□□ 0.08
CBX3-202ENST00000396386 TMEM88BA6NKF7 163 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 TMEM63AO94886 807 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 ZBED1O96006 694 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 GHRP10912 638 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 ZFXP17010 805 aaPredicted RBP15.56■□□□□ 0.08
CBX3-202ENST00000396386 L1CAMP32004 1257 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 MRPS5P82675 430 aaKnown RBP15.56■□□□□ 0.08
CBX3-202ENST00000396386 RNASELQ05823 741 aaKnown RBP15.56■□□□□ 0.08
CBX3-202ENST00000396386 PAQR9Q6ZVX9 377 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 SPATS2Q86XZ4 545 aaKnown RBP15.56■□□□□ 0.08
CBX3-202ENST00000396386 CDKL3Q8IVW4 592 aaPredicted RBP15.56■□□□□ 0.08
CBX3-202ENST00000396386 DEFB106AQ8N104 65 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 PCSK9Q8NBP7 692 aaKnown RBP15.56■□□□□ 0.08
CBX3-202ENST00000396386 RTP4Q96DX8 246 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 ADAM33Q9BZ11 813 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 FAM107BQ9H098 131 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 NRDE2Q9H7Z3 1164 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 PPCSQ9HAB8 311 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 CRTAC1Q9NQ79 661 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 MIOSQ9NXC5 875 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 XPO7Q9UIA9 1087 aaKnown RBP15.56■□□□□ 0.08
CBX3-202ENST00000396386 RRP15Q9Y3B9 282 aaKnown RBP15.56■□□□□ 0.08
CBX3-202ENST00000396386 HEY1Q9Y5J3 304 aa15.56■□□□□ 0.08
CBX3-202ENST00000396386 BCLAF3A2AJT9 711 aaKnown RBP15.55■□□□□ 0.08
CBX3-202ENST00000396386 CASTOR2A6NHX0 329 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 KCNN4O15554 427 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 ZNF623O75123 536 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 ELNP15502 786 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 AFF1P51825 1210 aaKnown RBP15.55■□□□□ 0.08
CBX3-202ENST00000396386 ATXN1P54253 815 aaKnown RBP15.55■□□□□ 0.08
CBX3-202ENST00000396386 DSC3Q14574 896 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 SLC25A52Q3SY17 297 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 KIAA0319Q5VV43 1072 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 CCSAPQ6IQ19 270 aaPredicted RBP15.55■□□□□ 0.08
CBX3-202ENST00000396386 SRLQ86TD4 932 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 FAM35AQ86V20 835 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 TAB3Q8N5C8 712 aaPredicted RBP15.55■□□□□ 0.08
CBX3-202ENST00000396386 CCDC185Q8N715 623 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 ATP11CQ8NB49 1132 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 C3orf58Q8NDZ4 430 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 KCTD15Q96SI1 283 aaPredicted RBP15.55■□□□□ 0.08
CBX3-202ENST00000396386 EURLQ9NYK6 297 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 PAK5Q9P286 719 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 CDH9Q9ULB4 789 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 STAP1Q9ULZ2 295 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 PATJQ8NI35 1801 aa15.55■□□□□ 0.08
CBX3-202ENST00000396386 E7ESA3 106 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 MGEA5O60502 916 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 FBXO21O94952 628 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 IGFBP6P24592 240 aaPredicted RBP15.54■□□□□ 0.08
CBX3-202ENST00000396386 PHBP35232 272 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 NR1H3Q13133 447 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 PTK7Q13308 1070 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 LPIN1Q14693 890 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 TMED2Q15363 201 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 HP1BP3Q5SSJ5 553 aaPredicted RBP15.54■□□□□ 0.08
CBX3-202ENST00000396386 PPP1R21Q6ZMI0 780 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 TDRPQ86YL5 185 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 ANKMY2Q8IV38 441 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 CCDC13Q8IYE1 715 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 RNF169Q8NCN4 708 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 NOD1Q9Y239 953 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 PTCH2Q9Y6C5 1203 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 ATXN2Q99700 1313 aaKnown RBP15.54■□□□□ 0.08
CBX3-202ENST00000396386 AP1G2O75843 785 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 BEST1O76090 585 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 ODC1P11926 461 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 PCSK1P29120 753 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 NOS2P35228 1153 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 MAP3K7CLP57077 242 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 YWHAZP63104 245 aaKnown RBP15.54■□□□□ 0.08
CBX3-202ENST00000396386 GAD2Q05329 585 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 GRIK3Q13003 919 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 NOGQ13253 232 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms