RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 RPL22P35268 128 aaKnown RBP12.65□□□□□ -0.38
ITGB1-202ENST00000396033 ATP5OP48047 213 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 MAP3K7CLP57077 242 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 IFI35P80217 286 aaPredicted RBP12.65□□□□□ -0.38
ITGB1-202ENST00000396033 DSC3Q14574 896 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 CENPIQ92674 756 aaPredicted RBP12.65□□□□□ -0.38
ITGB1-202ENST00000396033 PRCCQ92733 491 aaPredicted RBP12.65□□□□□ -0.38
ITGB1-202ENST00000396033 SELENOSQ9BQE4 189 aa12.65□□□□□ -0.38
ITGB1-202ENST00000396033 DHX35Q9H5Z1 703 aaKnown RBP12.65□□□□□ -0.38
ITGB1-202ENST00000396033 ZNF623O75123 536 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 CABYRO75952 493 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 TGM2P21980 687 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 HOXD10P28358 340 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 SULT1E1P49888 294 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 ACLYP53396 1101 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 BCAR1P56945 870 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 ADCY1Q08828 1119 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 UPP1Q16831 310 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 MFSD5Q6N075 450 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 PPIL6Q8IXY8 311 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 DEFB106AQ8N104 65 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 PQLC3Q8N755 202 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 CNOT10Q9H9A5 744 aaKnown RBP12.65□□□□□ -0.39
ITGB1-202ENST00000396033 AP4E1Q9UPM8 1137 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 HEY1Q9Y5J3 304 aa12.65□□□□□ -0.39
ITGB1-202ENST00000396033 HTTP42858 3142 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 GOLGA8MH3BSY2 632 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 DAB1O75553 588 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 MATKP42679 507 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 PAN2Q504Q3 1202 aaKnown RBP12.64□□□□□ -0.39
ITGB1-202ENST00000396033 FAM35AQ86V20 835 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 PLD5Q8N7P1 536 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 PCDH19Q8TAB3 1148 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 RAET1EQ8TD07 263 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
ITGB1-202ENST00000396033 AP1G2O75843 785 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 MRPS5P82675 430 aaKnown RBP12.64□□□□□ -0.39
ITGB1-202ENST00000396033 TRIM71Q2Q1W2 868 aaKnown RBP12.64□□□□□ -0.39
ITGB1-202ENST00000396033 DEFB115Q30KQ5 88 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 MAP3K21Q5TCX8 1036 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 CENPUQ71F23 418 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 VSIG1Q86XK7 387 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 CCDC185Q8N715 623 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 KCTD13Q8WZ19 329 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 SERPINB12Q96P63 405 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 MYBPHLA2RUH7 354 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 I3L4J1 428 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 TRPA1O75762 1119 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 ODC1P11926 461 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 CYP2F1P24903 491 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 NDUFV1P49821 464 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 DPYSL2Q16555 572 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 TIGD5Q53EQ6 642 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 DCAF6Q58WW2 860 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 HP1BP3Q5SSJ5 553 aaPredicted RBP12.64□□□□□ -0.39
ITGB1-202ENST00000396033 SLC9A4Q6AI14 798 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 STRADAQ7RTN6 431 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 CPT1BQ92523 772 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 PCED1BQ96HM7 432 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 TTC25Q96NG3 672 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 CDH9Q9ULB4 789 aa12.64□□□□□ -0.39
ITGB1-202ENST00000396033 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.64□□□□□ -0.39
ITGB1-202ENST00000396033 B3GAT3O94766 335 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 HNRNPH1P31943 449 aaKnown RBP12.63□□□□□ -0.39
ITGB1-202ENST00000396033 TKTL1P51854 596 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 RABGGTBP53611 331 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 NRLP54845 237 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 BASP1P80723 227 aaKnown RBP12.63□□□□□ -0.39
ITGB1-202ENST00000396033 GRIK3Q13003 919 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 FASTKD3Q14CZ7 662 aaKnown RBP12.63□□□□□ -0.39
ITGB1-202ENST00000396033 ANKRD22Q5VYY1 191 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 ZBED8Q8IZ13 594 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 CCDC77Q9BR77 488 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 EPN3Q9H201 632 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 MAP3K6O95382 1288 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 ABHD2P08910 425 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 PCSK1P29120 753 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 STIP1P31948 543 aaKnown RBP12.63□□□□□ -0.39
ITGB1-202ENST00000396033 L1CAMP32004 1257 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 LIG3P49916 1009 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 YWHAZP63104 245 aaKnown RBP12.63□□□□□ -0.39
ITGB1-202ENST00000396033 PDIA2Q13087 525 aaKnown RBP12.63□□□□□ -0.39
ITGB1-202ENST00000396033 HIF1AQ16665 826 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 SLC25A52Q3SY17 297 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 CCDC38Q502W7 563 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 FAM26DQ5JW98 314 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 FAM131BQ86XD5 332 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
ITGB1-202ENST00000396033 HASPINQ8TF76 798 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 PPM1EQ8WY54 764 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 FAF2Q96CS3 445 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 KCTD15Q96SI1 283 aaPredicted RBP12.63□□□□□ -0.39
ITGB1-202ENST00000396033 CXorf56Q9H5V9 222 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 PPANQ9NQ55 473 aaKnown RBP12.63□□□□□ -0.39
ITGB1-202ENST00000396033 CTNNAL1Q9UBT7 734 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 SYNJ2BP-COX16A0A087WUM0 186 aa12.63□□□□□ -0.39
ITGB1-202ENST00000396033 TAOK1Q7L7X3 1001 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms