RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 MDH1BQ5I0G3 518 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 ZNF560Q96MR9 790 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 MIOSQ9NXC5 875 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 H0YHG0 523 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 GNAT1P11488 350 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 GPX6P59796 221 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 SARNPP82979 210 aaKnown RBP18.63■□□□□ 0.57
SREBF1-204ENST00000395756 SMAD1Q15797 465 aaKnown RBP18.63■□□□□ 0.57
SREBF1-204ENST00000395756 BOLA3Q53S33 107 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 NUGGCQ68CJ6 796 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 PQLC3Q8N755 202 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 B3GALNT2Q8NCR0 500 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 TBCBQ99426 244 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 A0A1W2PPM1 405 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 APOL1O14791 398 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 CLCNKBP51801 687 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 BCAT1P54687 386 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 ARL4CP56559 192 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 ACAP1Q15027 740 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 TNFAIP8L3Q5GJ75 292 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 UNC93AQ86WB7 457 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 DEFB106AQ8N104 65 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 KATNAL1Q9BW62 490 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 FGFR1OP2Q9NVK5 253 aa18.63■□□□□ 0.57
SREBF1-204ENST00000395756 GOLGA6L7A0A1B0GV03 622 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 ALOX15BO15296 676 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 GCAP28676 217 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 STX2P32856 288 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 TFDP2Q14188 446 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 IGDCC3Q8IVU1 814 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 NAT8LQ8N9F0 302 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 USP6NLQ92738 828 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 ZNF317Q96PQ6 595 aaPredicted RBP18.62■□□□□ 0.57
SREBF1-204ENST00000395756 KCNK16Q96T55 309 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 CEP41Q9BYV8 373 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 EFR3BQ9Y2G0 817 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 INPP5FQ9Y2H2 1132 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 FARP1Q9Y4F1 1045 aaPredicted RBP18.62■□□□□ 0.57
SREBF1-204ENST00000395756 XPOTO43592 962 aaKnown RBP18.62■□□□□ 0.57
SREBF1-204ENST00000395756 ZBED1O96006 694 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 POMCP01189 267 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 APRTP07741 180 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 CYP2F1P24903 491 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 ATP5DP30049 168 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 FLT3LGP49771 235 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 SPRED3Q2MJR0 410 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 PDIK1LQ8N165 341 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 FBF1Q8TES7 1133 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 TRIB2Q92519 343 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 TSPYL2Q9H2G4 693 aaPredicted RBP18.62■□□□□ 0.57
SREBF1-204ENST00000395756 C12orf65Q9H3J6 166 aaKnown RBP18.62■□□□□ 0.57
SREBF1-204ENST00000395756 PIH1D1Q9NWS0 290 aaKnown RBP18.62■□□□□ 0.57
SREBF1-204ENST00000395756 SHOC2Q9UQ13 582 aa18.62■□□□□ 0.57
SREBF1-204ENST00000395756 MRPL42Q9Y6G3 142 aaKnown RBP18.62■□□□□ 0.57
SREBF1-204ENST00000395756 DESP17661 470 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 AMPD1P23109 780 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 AXLP30530 894 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 THPOP40225 353 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 SCNN1GP51170 649 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 NOMO1Q15155 1222 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 TAZQ16635 292 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 SV2CQ496J9 727 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 KIAA0319Q5VV43 1072 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 MICALCLQ6ZW33 695 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 FUKQ8N0W3 1084 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 TRIM56Q9BRZ2 755 aaKnown RBP18.61■□□□□ 0.57
SREBF1-204ENST00000395756 RHOBTB2Q9BYZ6 727 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 ETNK2Q9NVF9 386 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 DDX43Q9NXZ2 648 aaKnown RBP18.61■□□□□ 0.57
SREBF1-204ENST00000395756 MKI67P46013 3256 aaKnown RBP18.61■□□□□ 0.57
SREBF1-204ENST00000395756 CREB3O43889 395 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 YWHAGP61981 247 aaKnown RBP eCLIP18.61■□□□□ 0.57
SREBF1-204ENST00000395756 FAM47EQ6ZV65 393 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 WDR83Q9BRX9 315 aaKnown RBP18.61■□□□□ 0.57
SREBF1-204ENST00000395756 AGO3Q9H9G7 860 aaKnown RBP18.61■□□□□ 0.57
SREBF1-204ENST00000395756 NKIRAS1Q9NYS0 192 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 AP4E1Q9UPM8 1137 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 CLUHO75153 1309 aa18.61■□□□□ 0.57
SREBF1-204ENST00000395756 LAMA2P24043 3122 aaKnown RBP18.61■□□□□ 0.57
SREBF1-204ENST00000395756 GHRP10912 638 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 GOT1P17174 413 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 ELK3P41970 407 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 DSTYKQ6XUX3 929 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 HFE2Q6ZVN8 426 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 CRYBG2Q8N1P7 616 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 GIMAP7Q8NHV1 300 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 LRRC4Q9HBW1 653 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 FAM105AQ9NUU6 356 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 CAPN7Q9Y6W3 813 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 CHRNA1P02708 482 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 KCNE1P15382 129 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 PTPN1P18031 435 aaKnown RBP18.6■□□□□ 0.57
SREBF1-204ENST00000395756 SULT1E1P49888 294 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 MRPS6P82932 125 aaKnown RBP18.6■□□□□ 0.57
SREBF1-204ENST00000395756 SLC10A2Q12908 348 aaPredicted RBP18.6■□□□□ 0.57
SREBF1-204ENST00000395756 CCDC121Q6ZUS5 278 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 CFAP36Q96G28 342 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 TNIP3Q96KP6 325 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 SENP8Q96LD8 212 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 MYBPHLA2RUH7 354 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms