RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 GRIA1P42261 906 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 ABCG1P45844 678 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 ZNF143P52747 638 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 SARNPP82979 210 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 GBE1Q04446 702 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 IFRD2Q12894 506 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 NBPF20Q3BBV1 942 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 SLC45A4Q5BKX6 768 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 FAM47CQ5HY64 1035 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 CELF3Q5SZQ8 465 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 ATG16L1Q676U5 607 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 DSTYKQ6XUX3 929 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 FAM43BQ6ZT52 329 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 ARHGAP24Q8N264 748 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 MAGEC3Q8TD91 643 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 STK32AQ8WU08 396 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 ATP2A3Q93084 1043 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 ZNF570Q96NI8 536 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 RNF157Q96PX1 679 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 MED10Q9BTT4 135 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 SNRNP25Q9BV90 132 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 SLC17A6Q9P2U8 582 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 STOML1Q9UBI4 398 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 PCDHGC3Q9UN70 934 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 DOCK5Q9H7D0 1870 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 LTBP1Q14766 1721 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 HCRTO43612 131 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 ARF4P18085 180 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 AMPD1P23109 780 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 PTDSS1P48651 473 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 RPL10AP62906 217 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 TNFAIP2Q03169 654 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 TARBP2Q15633 366 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 C1orf146Q5VVC0 180 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 PMF1Q6P1K2 205 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 TRMT10BQ6PF06 316 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 TDRPQ86YL5 185 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 UNC5BQ8IZJ1 945 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 POU5F2Q8N7G0 328 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 DCAKDQ8WVC6 231 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 DNAJC9Q8WXX5 260 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 UTP4Q969X6 686 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 APOPT1Q96IL0 206 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 NMUR2Q9GZQ4 415 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 LRMDAQ9H2I8 198 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 SMYD2Q9NRG4 433 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 SNTG2Q9NY99 539 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 BARX2Q9UMQ3 279 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 TXNDC9O14530 226 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 IQCF3P0C7M6 154 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 KCNA4P22459 653 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 AKAP5P24588 427 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 CYP2F1P24903 491 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 BST1Q10588 318 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 STX3Q13277 289 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 ACVR2BQ13705 512 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 KHDC1Q4VXA5 237 aaKnown RBP10.93□□□□□ -0.66
ACTN1-203ENST00000394419 BOLA3Q53S33 107 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 DPP9Q86TI2 863 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 EXOC8Q8IYI6 725 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 PLD5Q8N7P1 536 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 BANPQ8N9N5 519 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 L3MBTL3Q96JM7 780 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-203ENST00000394419 SNX25Q9H3E2 840 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 MTO1Q9Y2Z2 717 aaKnown RBP10.93□□□□□ -0.66
ACTN1-203ENST00000394419 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.93□□□□□ -0.66
ACTN1-203ENST00000394419 MEI4A8MW99 385 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 C2CD2LO14523 706 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 B4GALT4O60513 344 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 USP12O75317 370 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 LUC7L3O95232 432 aaKnown RBP10.93□□□□□ -0.66
ACTN1-203ENST00000394419 ATG7O95352 703 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 CYP2C8P10632 490 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 ICAM3P32942 547 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 GPD2P43304 727 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 IREB2P48200 963 aaKnown RBP10.93□□□□□ -0.66
ACTN1-203ENST00000394419 MOGSQ13724 837 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 DCAF6Q58WW2 860 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 KCNT2Q6UVM3 1135 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 HACE1Q8IYU2 909 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 ANKLE1Q8NAG6 615 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 CLEC4CQ8WTT0 213 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 PGBD4Q96DM1 585 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 CLPTM1LQ96KA5 538 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 BTBD10Q9BSF8 475 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 PPCSQ9HAB8 311 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 ETNK2Q9NVF9 386 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 FARP1Q9Y4F1 1045 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-203ENST00000394419 CILPO75339 1184 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 USP2O75604 605 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-203ENST00000394419 STK10O94804 968 aaKnown RBP10.93□□□□□ -0.66
ACTN1-203ENST00000394419 CCDC130P13994 396 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 GTF2A2P52657 109 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 CRYMQ14894 314 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 TSHZ1Q6ZSZ6 1077 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 CDHR3Q6ZTQ4 885 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 ASRGL1Q7L266 308 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 PID1Q7Z2X4 250 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 RIOX2Q8IUF8 465 aa10.93□□□□□ -0.66
ACTN1-203ENST00000394419 PPP4R1Q8TF05 950 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms