RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TAS1R1Q7RTX1 841 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 FAM131BQ86XD5 332 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 SCAMP5Q8TAC9 235 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 SLC7A14Q8TBB6 771 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 TEKT4Q8WW24 435 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 EDEM1Q92611 657 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 CENPIQ92674 756 aaPredicted RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 ZBTB9Q96C00 473 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 VWCEQ96DN2 955 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 TTPALQ9BTX7 342 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 SNRNP25Q9BV90 132 aaKnown RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 FUT8Q9BYC5 575 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 DHX35Q9H5Z1 703 aaKnown RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 ZNF148Q9UQR1 794 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 PCDHB5Q9Y5E4 795 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 NLRC5Q86WI3 1866 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 PTPRDP23468 1912 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 H7C4K7 107 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 KIAA0355O15063 1070 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 SASH3O75995 380 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 PITX1P78337 314 aaPredicted RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 DEFB103AP81534 67 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 KRT17Q04695 432 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 DEUP1Q05D60 604 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 BYSLQ13895 437 aaKnown RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 DPYSL3Q14195 570 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 PDK2Q15119 407 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 TRIP13Q15645 432 aaPredicted RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 CA9Q16790 459 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 RTP2Q5QGT7 225 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 SDHAF4Q5VUM1 108 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 DUPD1Q68J44 220 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 MFSD5Q6N075 450 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 EMBQ6PCB8 327 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 PRSS55Q6UWB4 352 aaPredicted RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 CYP4V2Q6ZWL3 525 aaPredicted RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 ADAM32Q8TC27 787 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 BCL7CQ8WUZ0 217 aaPredicted RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 TOP1MTQ969P6 601 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 SLC2A13Q96QE2 648 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 C11orf84Q9BUA3 381 aaPredicted RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 ADAM33Q9BZ11 813 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 SAE1Q9UBE0 346 aaPredicted RBP9.01□□□□□ -0.97
TDP1-203ENST00000393454 ASIC3Q9UHC3 531 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 EFR3BQ9Y2G0 817 aa9.01□□□□□ -0.97
TDP1-203ENST00000393454 LIASO43766 372 aa9□□□□□ -0.97
TDP1-203ENST00000393454 FYNP06241 537 aa9□□□□□ -0.97
TDP1-203ENST00000393454 FAM153BP0C7A2 387 aa9□□□□□ -0.97
TDP1-203ENST00000393454 RDXP35241 583 aaKnown RBP9□□□□□ -0.97
TDP1-203ENST00000393454 SLC5A3P53794 718 aa9□□□□□ -0.97
TDP1-203ENST00000393454 TFDP2Q14188 446 aa9□□□□□ -0.97
TDP1-203ENST00000393454 MRPL58Q14197 206 aaKnown RBP9□□□□□ -0.97
TDP1-203ENST00000393454 DDR2Q16832 855 aa9□□□□□ -0.97
TDP1-203ENST00000393454 FAM153CQ494X1 144 aa9□□□□□ -0.97
TDP1-203ENST00000393454 KIAA1841Q6NSI8 718 aa9□□□□□ -0.97
TDP1-203ENST00000393454 BBS12Q6ZW61 710 aa9□□□□□ -0.97
TDP1-203ENST00000393454 ANKS3Q6ZW76 656 aa9□□□□□ -0.97
TDP1-203ENST00000393454 ZNF365Q70YC5 407 aa9□□□□□ -0.97
TDP1-203ENST00000393454 OTOP2Q7RTS6 562 aa9□□□□□ -0.97
TDP1-203ENST00000393454 CCDC185Q8N715 623 aa9□□□□□ -0.97
TDP1-203ENST00000393454 TTC13Q8NBP0 860 aa9□□□□□ -0.97
TDP1-203ENST00000393454 ATAD1Q8NBU5 361 aa9□□□□□ -0.97
TDP1-203ENST00000393454 IRGQQ8WZA9 623 aa9□□□□□ -0.97
TDP1-203ENST00000393454 NPY6RQ99463 290 aa9□□□□□ -0.97
TDP1-203ENST00000393454 CWH43Q9H720 699 aa9□□□□□ -0.97
TDP1-203ENST00000393454 FAM204AQ9H8W3 233 aa9□□□□□ -0.97
TDP1-203ENST00000393454 PCDH18Q9HCL0 1135 aa9□□□□□ -0.97
TDP1-203ENST00000393454 PNPLA8Q9NP80 782 aa9□□□□□ -0.97
TDP1-203ENST00000393454 CALCOCO1Q9P1Z2 691 aa9□□□□□ -0.97
TDP1-203ENST00000393454 PRKAG2Q9UGJ0 569 aa9□□□□□ -0.97
TDP1-203ENST00000393454 FAM153AQ9UHL3 310 aa9□□□□□ -0.97
TDP1-203ENST00000393454 DNPEPQ9ULA0 475 aa9□□□□□ -0.97
TDP1-203ENST00000393454 AP4E1Q9UPM8 1137 aa9□□□□□ -0.97
TDP1-203ENST00000393454 SPDYE4A6NLX3 237 aa9□□□□□ -0.97
TDP1-203ENST00000393454 ZBBXA8MT70 800 aa9□□□□□ -0.97
TDP1-203ENST00000393454 BHMG1C9JSJ3 638 aaPredicted RBP9□□□□□ -0.97
TDP1-203ENST00000393454 C2CD2LO14523 706 aa9□□□□□ -0.97
TDP1-203ENST00000393454 TRIM66O15016 1216 aa9□□□□□ -0.97
TDP1-203ENST00000393454 MDM4O15151 490 aa9□□□□□ -0.97
TDP1-203ENST00000393454 EFCAB14O75071 495 aa9□□□□□ -0.97
TDP1-203ENST00000393454 EN2P19622 333 aaPredicted RBP9□□□□□ -0.97
TDP1-203ENST00000393454 RPL21P46778 160 aaKnown RBP9□□□□□ -0.97
TDP1-203ENST00000393454 GPR15P49685 360 aa9□□□□□ -0.97
TDP1-203ENST00000393454 VPS41P49754 854 aa9□□□□□ -0.97
TDP1-203ENST00000393454 ARSEP51690 589 aa9□□□□□ -0.97
TDP1-203ENST00000393454 PLTPP55058 493 aa9□□□□□ -0.97
TDP1-203ENST00000393454 WDR5P61964 334 aaKnown RBP9□□□□□ -0.97
TDP1-203ENST00000393454 OTUD4Q01804 1114 aaKnown RBP9□□□□□ -0.97
TDP1-203ENST00000393454 LMNB2Q03252 620 aa9□□□□□ -0.97
TDP1-203ENST00000393454 BTG3Q14201 252 aaPredicted RBP9□□□□□ -0.97
TDP1-203ENST00000393454 TAZQ16635 292 aa9□□□□□ -0.97
TDP1-203ENST00000393454 USP41Q3LFD5 358 aa9□□□□□ -0.97
TDP1-203ENST00000393454 ANKRD20A8PQ5CZ79 823 aa9□□□□□ -0.97
TDP1-203ENST00000393454 BSPRYQ5W0U4 402 aa9□□□□□ -0.97
TDP1-203ENST00000393454 BTBD8Q5XKL5 378 aa9□□□□□ -0.97
TDP1-203ENST00000393454 PM20D1Q6GTS8 502 aa9□□□□□ -0.97
TDP1-203ENST00000393454 C1orf228Q6PIY5 440 aa9□□□□□ -0.97
TDP1-203ENST00000393454 KCNT2Q6UVM3 1135 aa9□□□□□ -0.97
TDP1-203ENST00000393454 VSTM1Q6UX27 236 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms