RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 DGKIO75912 1065 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 T-ENOLP0DO92 83 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ECHS1P30084 290 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 BAG6P46379 1132 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 HNRNPFP52597 415 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 WDR4P57081 412 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ANTXR2P58335 489 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 VAC14Q08AM6 782 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 NME3Q13232 169 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 BOLA3Q53S33 107 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 LLGL2Q6P1M3 1020 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 SYDE1Q6ZW31 735 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 PLD3Q8IV08 490 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 RPTORQ8N122 1335 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 LRRC47Q8N1G4 583 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 PROM2Q8N271 834 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 GUF1Q8N442 669 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 CCDC33Q8N5R6 958 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 MINDY2Q8NBR6 621 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ZSWIM2Q8NEG5 633 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 FLAD1Q8NFF5 587 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 PDCD6IPQ8WUM4 868 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 S100ZQ8WXG8 99 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 LRRC39Q96DD0 335 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 HEMGNQ9BXL5 484 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 WNT8AQ9H1J5 351 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 IARS2Q9NSE4 1012 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 HEMK1Q9Y5R4 338 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 GJA3Q9Y6H8 435 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ZMYM2Q9UBW7 1377 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 SPATA31A6Q5VVP1 1343 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 A6NL46 340 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 CLDN3O15551 220 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 H6PDO95479 791 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 C6orf222P0C671 652 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 NUDT2P50583 147 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 BFSP1Q12934 665 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF362Q5T0B9 420 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 SPOPLQ6IQ16 392 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 C16orf89Q6UX73 402 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ALYREFQ86V81 257 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 SNX32Q86XE0 403 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 UNC45BQ8IWX7 931 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ALDH16A1Q8IZ83 802 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 REXO1Q8N1G1 1221 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 FBXW8Q8N3Y1 598 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 CHCHD4Q8N4Q1 142 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 EFCAB3Q8N7B9 438 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TBATAQ96M53 351 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TRIM9Q9C026 710 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TP63Q9H3D4 680 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TOR4AQ9NXH8 423 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 KLHL3Q9UH77 587 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 FAM172BPA6NC97 362 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ACSL4O60488 711 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 LRRN2O75325 713 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 MYCP01106 439 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 CALB1P05937 261 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 OR52Z1P0C646 297 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TRIM49P0CI25 452 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TRIM49CP0CI26 452 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 MYBP10242 640 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF23P17027 643 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TNFAIP2Q03169 654 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 CENPCQ03188 943 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TTC7BQ86TV6 843 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 SLC13A5Q86YT5 568 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 NATD1Q8N6N6 113 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 ADCY4Q8NFM4 1077 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 PSMA8Q8TAA3 256 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 LARP4BQ92615 738 aaKnown RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 RTFDC1Q9BY42 306 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-201ENST00000393077 DCLK3Q9C098 648 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 TTYH3Q9C0H2 523 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 OSGEPQ9NPF4 335 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 SNTG2Q9NY99 539 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 PCDHA4Q9UN74 947 aa7.88□□□□□ -1.15
VTI1A-201ENST00000393077 WTIPA6NIX2 430 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 SGK1O00141 431 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 NOS1APO75052 506 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 TSC22D2O75157 780 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 KLRK1P26718 216 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 SF3B3Q15393 1217 aaKnown RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 PRR5LQ6MZQ0 368 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 ZCCHC8Q6NZY4 707 aaKnown RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 FAM117BQ6P1L5 589 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 PDXDC2PQ6P474 469 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 PDIK1LQ8N165 341 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 SLC44A5Q8NCS7 719 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 FIG4Q92562 907 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 AK8Q96MA6 479 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 EMILIN2Q9BXX0 1053 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 THAP1Q9NVV9 213 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 TMEM59LQ9UK28 342 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 FRMPD2Q68DX3 1309 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 USP17L3A6NCW0 530 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 USP17L4A6NCW7 530 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 TM9SF1O15321 606 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 NMT2O60551 498 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 ARHGEF15O94989 841 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms