RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FBXO44Q9H4M3 255 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 CYP3A43Q9HB55 503 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 TLR8Q9NR97 1041 aaKnown RBP17.5■□□□□ 0.39
PTPRK-208ENST00000392449 COMMD8Q9NX08 183 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 SCML2Q9UQR0 700 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 NUP205Q92621 2012 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 TULP3O75386 442 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 EIF2DP41214 584 aaKnown RBP17.5■□□□□ 0.39
PTPRK-208ENST00000392449 PRCPP42785 496 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 MRPS21P82921 87 aaKnown RBP17.5■□□□□ 0.39
PTPRK-208ENST00000392449 CREB5Q02930 508 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 GAD2Q05329 585 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 FMR1NBQ8N0W7 255 aaPredicted RBP17.5■□□□□ 0.39
PTPRK-208ENST00000392449 ERLEC1Q96DZ1 483 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 SPHK2Q9NRA0 654 aa17.5■□□□□ 0.39
PTPRK-208ENST00000392449 CIZ1Q9ULV3 898 aaPredicted RBP17.5■□□□□ 0.39
PTPRK-208ENST00000392449 HOXC11O43248 304 aaPredicted RBP17.49■□□□□ 0.39
PTPRK-208ENST00000392449 GRIA2P42262 883 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 MXI1P50539 228 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 PMS1P54277 932 aaKnown RBP17.49■□□□□ 0.39
PTPRK-208ENST00000392449 ELF2Q15723 593 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 EDRF1Q3B7T1 1238 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 KRT39Q6A163 491 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 SCD5Q86SK9 330 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 CCDC26Q8TAB7 109 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 TATDN2Q93075 761 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 BHMTQ93088 406 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 OTUB2Q96DC9 234 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 P2RY11Q96G91 374 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 CNOT6LQ96LI5 555 aaKnown RBP17.49■□□□□ 0.39
PTPRK-208ENST00000392449 CYLDQ9NQC7 956 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 HCN2Q9UL51 889 aa17.49■□□□□ 0.39
PTPRK-208ENST00000392449 TRIM49BA6NDI0 452 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 TBC1D3BA6NDS4 549 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 NEDD8-MDP1E9PL57 170 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 RARGP13631 454 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 ATP5C1P36542 298 aaKnown RBP17.48■□□□□ 0.39
PTPRK-208ENST00000392449 WASP42768 502 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 KIF11P52732 1056 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 CBWD6Q4V339 395 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 USP39Q53GS9 565 aaKnown RBP17.48■□□□□ 0.39
PTPRK-208ENST00000392449 DCAF17Q5H9S7 520 aaPredicted RBP17.48■□□□□ 0.39
PTPRK-208ENST00000392449 CBWD3Q5JTY5 395 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 CBWD5Q5RIA9 395 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 BTBD8Q5XKL5 378 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 TPGS1Q6ZTW0 290 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 MIB1Q86YT6 1006 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 HMGB4Q8WW32 186 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 HEXIM2Q96MH2 286 aaKnown RBP17.48■□□□□ 0.39
PTPRK-208ENST00000392449 CISHQ9NSE2 258 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.48■□□□□ 0.39
PTPRK-208ENST00000392449 NAGPAQ9UK23 515 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 PCDHGA5Q9Y5G8 931 aa17.48■□□□□ 0.39
PTPRK-208ENST00000392449 A0A0A0MRY4 1105 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.47■□□□□ 0.39
PTPRK-208ENST00000392449 RHOBTB1O94844 696 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 EPB41P11171 864 aaKnown RBP17.47■□□□□ 0.39
PTPRK-208ENST00000392449 GTF2H1P32780 548 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 RAD23BP54727 409 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 C10orf120Q5SQS8 335 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 C10orf76Q5T2E6 689 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 STPG1Q5TH74 334 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 TCERG1LQ5VWI1 586 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 PMS2CLQ68D20 193 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 HTR3DQ70Z44 454 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 SLC4A11Q8NBS3 891 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 CCDC150Q8NCX0 1101 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 FBXL13Q8NEE6 735 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 CNTNAP3BQ96NU0 1288 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 DUSP16Q9BY84 665 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 CNTNAP3Q9BZ76 1288 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 DNAJC17Q9NVM6 304 aaKnown RBP17.47■□□□□ 0.39
PTPRK-208ENST00000392449 RAB20Q9NX57 234 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 DEC1Q9P2X7 70 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 PCDHA5Q9Y5H7 936 aa17.47■□□□□ 0.39
PTPRK-208ENST00000392449 CNOT1A5YKK6 2376 aaKnown RBP17.46■□□□□ 0.39
PTPRK-208ENST00000392449 TCRBV21S2A2A0A5A6 115 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 BCLAF3A2AJT9 711 aaKnown RBP17.46■□□□□ 0.39
PTPRK-208ENST00000392449 PATE3B3GLJ2 98 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 CETN3O15182 167 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 CAVIN2O95810 425 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 TRIM21P19474 475 aaKnown RBP17.46■□□□□ 0.39
PTPRK-208ENST00000392449 TNFRSF4P43489 277 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 ENPEPQ07075 957 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 ANKRD40Q6AI12 368 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 IL31Q6EBC2 164 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 TOGARAM2Q6ZUX3 1019 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 ZNF513Q8N8E2 541 aaPredicted RBP17.46■□□□□ 0.39
PTPRK-208ENST00000392449 TERB1Q8NA31 727 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 ENGASEQ8NFI3 743 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 ACOX2Q99424 681 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 BBS2Q9BXC9 721 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 VPS45Q9NRW7 570 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 PLK2Q9NYY3 685 aa17.46■□□□□ 0.39
PTPRK-208ENST00000392449 BCCIPQ9P287 314 aaKnown RBP eCLIP17.46■□□□□ 0.39
PTPRK-208ENST00000392449 FOXD2O60548 495 aaPredicted RBP17.45■□□□□ 0.38
PTPRK-208ENST00000392449 HMBSP08397 361 aa17.45■□□□□ 0.38
PTPRK-208ENST00000392449 TYRP14679 529 aa17.45■□□□□ 0.38
PTPRK-208ENST00000392449 MCCD1P59942 119 aaPredicted RBP17.45■□□□□ 0.38
PTPRK-208ENST00000392449 EOGTQ5NDL2 527 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms