RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 LYPLA1O75608 230 aaPredicted RBP13.19□□□□□ -0.3
TTC39B-202ENST00000380850 ATP5DP30049 168 aa13.19□□□□□ -0.3
TTC39B-202ENST00000380850 ELF3P78545 371 aaPredicted RBP13.19□□□□□ -0.3
TTC39B-202ENST00000380850 SLC10A2Q12908 348 aaPredicted RBP13.19□□□□□ -0.3
TTC39B-202ENST00000380850 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
TTC39B-202ENST00000380850 CLUL1Q15846 466 aa13.19□□□□□ -0.3
TTC39B-202ENST00000380850 TAF1BQ53T94 588 aaPredicted RBP13.19□□□□□ -0.3
TTC39B-202ENST00000380850 SH3D19Q5HYK7 790 aa13.19□□□□□ -0.3
TTC39B-202ENST00000380850 ATP11CQ8NB49 1132 aa13.19□□□□□ -0.3
TTC39B-202ENST00000380850 ARRDC4Q8NCT1 418 aa13.19□□□□□ -0.3
TTC39B-202ENST00000380850 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
TTC39B-202ENST00000380850 RRAGCQ9HB90 399 aa13.19□□□□□ -0.3
TTC39B-202ENST00000380850 LRRC4Q9HBW1 653 aa13.19□□□□□ -0.3
TTC39B-202ENST00000380850 DNAJC6O75061 913 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 KCNA4P22459 653 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 HUNKP57058 714 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 CLDN10P78369 228 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 TMPRSS15P98073 1019 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 LAMC2Q13753 1193 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PPM1JQ5JR12 505 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 FASTKD5Q7L8L6 764 aaKnown RBP13.18□□□□□ -0.3
TTC39B-202ENST00000380850 OTOAQ7RTW8 1153 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 FAM228AQ86W67 206 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 DNAAF3Q8N9W5 541 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 VPS33BQ9H267 617 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 VPS11Q9H270 941 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PTPRHQ9HD43 1115 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PSMC3IPQ9P2W1 217 aaPredicted RBP13.18□□□□□ -0.3
TTC39B-202ENST00000380850 AP4E1Q9UPM8 1137 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 ASB14A6NK59 587 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 MEI4A8MW99 385 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 BHMG1C9JSJ3 638 aaPredicted RBP13.18□□□□□ -0.3
TTC39B-202ENST00000380850 B4GALT4O60513 344 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 OR4Q2P0C623 313 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 USP17L7P0C7H9 530 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 SMIM10L2AP0DMW4 78 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 SMIM10L2BP0DMW5 78 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PID1Q7Z2X4 250 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 AGGF1Q8N302 714 aaeCLIP13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PLD5Q8N7P1 536 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 AGAP11Q8TF27 550 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PCDH9Q9HC56 1237 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 CPSF2Q9P2I0 782 aaKnown RBP13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PHIPQ8WWQ0 1821 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 ZMPSTE24O75844 475 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PIGRP01833 764 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 GEMIN4P57678 1058 aaKnown RBP13.18□□□□□ -0.3
TTC39B-202ENST00000380850 RPL10AP62906 217 aaKnown RBP13.18□□□□□ -0.3
TTC39B-202ENST00000380850 OLFML2BQ68BL8 750 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 ARID3BQ8IVW6 561 aaPredicted RBP13.18□□□□□ -0.3
TTC39B-202ENST00000380850 DCLK2Q8N568 766 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 TTC8Q8TAM2 541 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 SLC35B2Q8TB61 432 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 ZNF75CPQ92670 426 aaPredicted RBP13.18□□□□□ -0.3
TTC39B-202ENST00000380850 LRRC37BQ96QE4 947 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 CYTH2Q99418 400 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 CNPY3Q9BT09 278 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 PCDH18Q9HCL0 1135 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 RABGEF1Q9UJ41 708 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 ARL2BPQ9Y2Y0 163 aa13.18□□□□□ -0.3
TTC39B-202ENST00000380850 TTC24A2A3L6 582 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 MYADML2A6NDP7 307 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 A6NNZ2 444 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 ENTPD5O75356 428 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 ERVK-10P10266 1014 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 VDRP11473 427 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 GBP1P32455 592 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 AVPR1AP37288 418 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 ALDH18A1P54886 795 aaKnown RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 HDAC4P56524 1084 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 CCNA1P78396 465 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 LMNB2Q03252 620 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 TUBB8Q3ZCM7 444 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 ALYREFQ86V81 257 aaKnown RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 POU5F2Q8N7G0 328 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 SGSM3Q96HU1 749 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 B3GALT6Q96L58 329 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 PTPN18Q99952 460 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 GCOM2Q9BZD3 368 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 HEY2Q9UBP5 337 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 TSR3Q9UJK0 312 aaKnown RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 NUMBLQ9Y6R0 609 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 FER1L6Q2WGJ9 1857 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 C3orf70A6NLC5 250 aaPredicted RBP13.17□□□□□ -0.3
TTC39B-202ENST00000380850 COPEO14579 308 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 FSBPO95073 299 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 PFKMP08237 780 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 SERPINB3P29508 390 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 LRRC36Q1X8D7 754 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 MARCH8Q5T0T0 291 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 BBS12Q6ZW61 710 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 PLPPR4Q7Z2D5 763 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 CMC1Q7Z7K0 106 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 TLK2Q86UE8 772 aa13.17□□□□□ -0.3
TTC39B-202ENST00000380850 CNPY4Q8N129 248 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms