RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 NUDT5Q9UKK9 219 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 CDH7Q9ULB5 785 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 OBSL1O75147 1896 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 DENND4AQ7Z401 1863 aa13.28□□□□□ -0.28
SMN1-202ENST00000380707 GOLGA8SH3BPF8 625 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 ZNF263O14978 683 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 SART1O43290 800 aaKnown RBP13.27□□□□□ -0.29
SMN1-202ENST00000380707 COCHO43405 550 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 TLR5O60602 858 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 DDX6P26196 483 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMN1-202ENST00000380707 GBP2P32456 591 aaPredicted RBP13.27□□□□□ -0.29
SMN1-202ENST00000380707 YWHAZP63104 245 aaKnown RBP13.27□□□□□ -0.29
SMN1-202ENST00000380707 MTF1Q14872 753 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 AAK1Q2M2I8 961 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 HECTD3Q5T447 861 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 FAM102AQ5T9C2 384 aaPredicted RBP13.27□□□□□ -0.29
SMN1-202ENST00000380707 BTBD8Q5XKL5 378 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 PPP1R2P3Q6NXS1 205 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 TOGARAM2Q6ZUX3 1019 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 ARL14EPQ8N8R7 260 aaPredicted RBP13.27□□□□□ -0.29
SMN1-202ENST00000380707 FAM149B1Q96BN6 582 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 VCPIP1Q96JH7 1222 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 PHF7Q9BWX1 381 aaPredicted RBP13.27□□□□□ -0.29
SMN1-202ENST00000380707 TASP1Q9H6P5 420 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 STRIP2Q9ULQ0 834 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 DENND4CQ5VZ89 1909 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 ANAPC1Q9H1A4 1944 aa13.27□□□□□ -0.29
SMN1-202ENST00000380707 TCRBV5S1A1TA0A578 114 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 ATMINO43313 823 aaPredicted RBP13.26□□□□□ -0.29
SMN1-202ENST00000380707 GJB6O95452 261 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 LAMP2P13473 410 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 HDCP19113 662 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 RRM1P23921 792 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 TUBP50607 506 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 GSCP56915 257 aaPredicted RBP13.26□□□□□ -0.29
SMN1-202ENST00000380707 RNASE9P60153 205 aaKnown RBP13.26□□□□□ -0.29
SMN1-202ENST00000380707 EFHC1Q5JVL4 640 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 RAD9BQ6WBX8 426 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 SLC26A9Q7LBE3 791 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 OTOP3Q7RTS5 596 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 LRRC8AQ8IWT6 810 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 CMTM8Q8IZV2 173 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 ZNF276Q8N554 614 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 ST13P5Q8NFI4 369 aaPredicted RBP13.26□□□□□ -0.29
SMN1-202ENST00000380707 ZSCAN18Q8TBC5 510 aaPredicted RBP13.26□□□□□ -0.29
SMN1-202ENST00000380707 ATXN2LQ8WWM7 1075 aaKnown RBP13.26□□□□□ -0.29
SMN1-202ENST00000380707 GOLGA1Q92805 767 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 RPGRIP1Q96KN7 1286 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 PACSIN1Q9BY11 444 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 SMG9Q9H0W8 520 aaKnown RBP13.26□□□□□ -0.29
SMN1-202ENST00000380707 POPDC2Q9HBU9 364 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 ABCC13Q9NSE7 274 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 ASNSD1Q9NWL6 643 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 TMEM59LQ9UK28 342 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 NAALADL1Q9UQQ1 740 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 FAM50BQ9Y247 325 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 USTQ9Y2C2 406 aa13.26□□□□□ -0.29
SMN1-202ENST00000380707 DOCK8Q8NF50 2099 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 TRAV19A0A0A6YYK7 116 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 SOBPA7XYQ1 873 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 C2CD4DB7Z1M9 353 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 MDM4O15151 490 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 HSF2BPO75031 334 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 LCA5LO95447 670 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 OLFM2O95897 454 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 GLI1P08151 1106 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 RALAP11233 206 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 NCAM1P13591 858 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 ABCB4P21439 1286 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 SCNN1AP37088 669 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 GALCP54803 685 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 FAM78AQ5JUQ0 283 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 C10orf120Q5SQS8 335 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 SYPL2Q5VXT5 272 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 ARID3BQ8IVW6 561 aaPredicted RBP13.25□□□□□ -0.29
SMN1-202ENST00000380707 C3orf20Q8ND61 904 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 ASB2Q96Q27 587 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 SLC2A13Q96QE2 648 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 THAP2Q9H0W7 228 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 WDR35Q9P2L0 1181 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 EPS15L1Q9UBC2 864 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 ZMYM5Q9UJ78 669 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 CCL26Q9Y258 94 aa13.25□□□□□ -0.29
SMN1-202ENST00000380707 EPN1Q9Y6I3 576 aaPredicted RBP13.25□□□□□ -0.29
SMN1-202ENST00000380707 ZFP37Q9Y6Q3 630 aaPredicted RBP13.25□□□□□ -0.29
SMN1-202ENST00000380707 CAPN9O14815 690 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 NDUFA10O95299 355 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 PRAMEF12O95522 483 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 CKMP06732 381 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 BMP1P13497 986 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 CYLC1P35663 651 aaPredicted RBP13.24□□□□□ -0.29
SMN1-202ENST00000380707 ATP5C1P36542 298 aaKnown RBP13.24□□□□□ -0.29
SMN1-202ENST00000380707 AVPR1AP37288 418 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 ZXDBP98169 803 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 EFEMP1Q12805 493 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 MAMLD1Q13495 774 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 DCAF6Q58WW2 860 aa13.24□□□□□ -0.29
SMN1-202ENST00000380707 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms