RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 SERPINF2P08697 491 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 MTA1Q13330 715 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 MARC1Q5VT66 337 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 SPATA21Q7Z572 469 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 CAMKK1Q8N5S9 505 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 TNIP2Q8NFZ5 429 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 TMC2Q8TDI7 906 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 PRMT1Q99873 361 aaKnown RBP11.27□□□□□ -0.6
LINC00654-201ENST00000379053 CDY2AQ9Y6F7 541 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 CDY1Q9Y6F8 540 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 RIMS1Q86UR5 1692 aaKnown RBP11.27□□□□□ -0.6
LINC00654-201ENST00000379053 HNRNPRO43390 633 aaKnown RBP11.27□□□□□ -0.6
LINC00654-201ENST00000379053 IGSF6O95976 241 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 FXR1P51114 621 aaKnown RBP eCLIP11.27□□□□□ -0.6
LINC00654-201ENST00000379053 C16orf87Q6PH81 154 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 TMEM159Q96B96 161 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 CAMKK2Q96RR4 588 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 ECSITQ9BQ95 431 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 CNPY3Q9BT09 278 aa11.27□□□□□ -0.6
LINC00654-201ENST00000379053 CYP7B1O75881 506 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 MTA2O94776 668 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 GLP2RO95838 553 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 LRRC8BQ6P9F7 803 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 KIAA1324Q6UXG2 1013 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 TUBGCP3Q96CW5 907 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 FAM167BQ9BTA0 163 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 THUMPD3Q9BV44 507 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 ELOVL4Q9GZR5 314 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 SMARCAL1Q9NZC9 954 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 DRG1Q9Y295 367 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 TDRKHQ9Y2W6 561 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 MRPS23Q9Y3D9 190 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 GTF2E2P29084 291 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 SHMT1P34896 483 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 GIT2Q14161 759 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 PABPC1LQ4VXU2 614 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 ALFQ53S48 1182 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 NOL9Q5SY16 702 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 DEPDC1Q5TB30 811 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 LLGL2Q6P1M3 1020 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 C16orf89Q6UX73 402 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 SYTL1Q8IYJ3 562 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 LGI2Q8N0V4 545 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 SERPINB11Q96P15 392 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 OMDQ99983 421 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 RBM22Q9NW64 420 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 GTF2A1LQ9UNN4 478 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 V9GYQ6 96 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 TBC1D4O60343 1298 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 PLIN5Q00G26 463 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 AASDHQ4L235 1098 aaPredicted RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 TPGS1Q6ZTW0 290 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 KCNV2Q8TDN2 545 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 TAS1R2Q8TE23 839 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 DCLK3Q9C098 648 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 MIR1-1HGQ9H1L0 117 aa11.27□□□□□ -0.61
LINC00654-201ENST00000379053 KRCC1Q9NPI7 259 aaPredicted RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 IARS2Q9NSE4 1012 aaKnown RBP11.27□□□□□ -0.61
LINC00654-201ENST00000379053 TLL1O43897 1013 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 KRT8P05787 483 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 CYP11B1P15538 503 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 TCN1P20061 433 aaPredicted RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 MLLT1Q03111 559 aaPredicted RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 ADIGQ0VDE8 80 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 GALNTL6Q49A17 601 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 RXFP2Q8WXD0 754 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 CELF6Q96J87 481 aaKnown RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 SLC9A3R1O14745 358 aaPredicted RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 DGKIO75912 1065 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 PTPRAP18433 802 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 GRK4P32298 578 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 DACT2Q5SW24 774 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 FBXL19Q6PCT2 694 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 B3GALNT2Q8NCR0 500 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 SHCBP1LQ9BZQ2 653 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 PADI4Q9UM07 663 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 SDR42E2A6NKP2 422 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 TRPC5OSA6NMA1 111 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 TRIM49D1C9J1S8 452 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 LGALS2P05162 132 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 EMC1Q8N766 993 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 GAD1Q99259 594 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 OXCT2Q9BYC2 517 aaPredicted RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 UMODL1Q5DID0 1318 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 CYP2A6P11509 494 aaPredicted RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 NDST1P52848 882 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
LINC00654-201ENST00000379053 CATSPER1Q8NEC5 780 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 OSCP1Q8WVF1 389 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 SERAC1Q96JX3 654 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 LRRC40Q9H9A6 602 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 TBC1D13Q9NVG8 400 aa11.26□□□□□ -0.61
LINC00654-201ENST00000379053 USP18Q9UMW8 372 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms