RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SCD5Q86SK9 330 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 ARHGEF19Q8IW93 802 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 FAM114A1Q8IWE2 563 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 BBS7Q8IWZ6 715 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 RBBP8NLQ8NC74 664 aaPredicted RBP17.68■□□□□ 0.42
HMGN4-201ENST00000377575 KAT5Q92993 513 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 ACDQ96AP0 544 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 FAM81BQ96LP2 452 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 EPC1Q9H2F5 836 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 LRRC4Q9HBW1 653 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 FBRSL1Q9HCM7 1045 aaKnown RBP17.68■□□□□ 0.42
HMGN4-201ENST00000377575 LMBRD1Q9NUN5 540 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 SLC8A2Q9UPR5 921 aa17.68■□□□□ 0.42
HMGN4-201ENST00000377575 K7ESF4 209 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 ZBED1O96006 694 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 MTIF2P46199 727 aaKnown RBP17.67■□□□□ 0.42
HMGN4-201ENST00000377575 GAD2Q05329 585 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 GAB4Q2WGN9 574 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 DPCR1Q3MIW9 517 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 PREPLQ4J6C6 727 aaPredicted RBP17.67■□□□□ 0.42
HMGN4-201ENST00000377575 LY6G5CQ5SRR4 150 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 BTBD8Q5XKL5 378 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 RHBDF2Q6PJF5 856 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 LCLAT1Q6UWP7 414 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 HTR3DQ70Z44 454 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 RSRC2Q7L4I2 434 aaKnown RBP17.67■□□□□ 0.42
HMGN4-201ENST00000377575 ENOSF1Q7L5Y1 443 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 LONP2Q86WA8 852 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 SIX6OS1Q8N1H7 587 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 RPLP0P6Q8NHW5 317 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 IPO9Q96P70 1041 aaKnown RBP17.67■□□□□ 0.42
HMGN4-201ENST00000377575 HINFPQ9BQA5 517 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 THAP9Q9H5L6 903 aa17.67■□□□□ 0.42
HMGN4-201ENST00000377575 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.67■□□□□ 0.42
HMGN4-201ENST00000377575 SMG5Q9UPR3 1016 aaKnown RBP17.67■□□□□ 0.42
HMGN4-201ENST00000377575 CFAP54Q96N23 3096 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 M0QYV0 167 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 MDM4O15151 490 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 APODP05090 189 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 ERCC5P28715 1186 aaPredicted RBP17.66■□□□□ 0.42
HMGN4-201ENST00000377575 HOXA6P31267 233 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 ZNF132P52740 706 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 YWHAGP61981 247 aaKnown RBP eCLIP17.66■□□□□ 0.42
HMGN4-201ENST00000377575 ADIGQ0VDE8 80 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 PKN3Q6P5Z2 889 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 TRIM65Q6PJ69 517 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 GBP6Q6ZN66 633 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 MIB1Q86YT6 1006 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 SUMF1Q8NBK3 374 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 UBA3Q8TBC4 463 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 KCTD13Q8WZ19 329 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 SECISBP2LQ93073 1101 aaKnown RBP17.66■□□□□ 0.42
HMGN4-201ENST00000377575 MED15Q96RN5 788 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 PNKPQ96T60 521 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 ULBP1Q9BZM6 244 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 SPHK2Q9NRA0 654 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 C2orf42Q9NWW7 574 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 RASAL2Q9UJF2 1139 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 NUDT5Q9UKK9 219 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 STRIP2Q9ULQ0 834 aa17.66■□□□□ 0.42
HMGN4-201ENST00000377575 OTOGLQ3ZCN5 2332 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 GTPBP10A4D1E9 387 aaKnown RBP17.65■□□□□ 0.42
HMGN4-201ENST00000377575 TULP2O00295 520 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 HOXC11O43248 304 aaPredicted RBP17.65■□□□□ 0.42
HMGN4-201ENST00000377575 KRT5P13647 590 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 BRD2P25440 801 aaKnown RBP17.65■□□□□ 0.42
HMGN4-201ENST00000377575 CNR2P34972 360 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 FNTBP49356 437 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 MFAP3P55082 362 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 COG7P83436 770 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 EFEMP1Q12805 493 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 CNGA2Q16280 664 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 EXOC3L4Q17RC7 722 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 ANO4Q32M45 955 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 PKDCCQ504Y2 493 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 CT47A1Q5JQC4 288 aaPredicted RBP17.65■□□□□ 0.42
HMGN4-201ENST00000377575 PM20D1Q6GTS8 502 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 TFAP2BQ92481 460 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 RUBCNQ92622 972 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 EZH1Q92800 747 aaPredicted RBP17.65■□□□□ 0.42
HMGN4-201ENST00000377575 WBP2Q969T9 261 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 KREMEN1Q96MU8 473 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 UBE2TQ9NPD8 197 aaPredicted RBP17.65■□□□□ 0.42
HMGN4-201ENST00000377575 CNGB3Q9NQW8 809 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 OLA1Q9NTK5 396 aaKnown RBP17.65■□□□□ 0.42
HMGN4-201ENST00000377575 RAB23Q9ULC3 237 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 ZNF510Q9Y2H8 683 aa17.65■□□□□ 0.42
HMGN4-201ENST00000377575 PTPRZ1P23471 2315 aaPredicted RBP17.65■□□□□ 0.42
HMGN4-201ENST00000377575 FRYLO94915 3013 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 EML5Q05BV3 1969 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 RNF225M0QZC1 329 aaPredicted RBP17.64■□□□□ 0.41
HMGN4-201ENST00000377575 GREM1O60565 184 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 KAT7O95251 611 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 KDSRQ06136 332 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 MAN2A1Q16706 1144 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 HEATR6Q6AI08 1181 aaKnown RBP17.64■□□□□ 0.41
HMGN4-201ENST00000377575 SYT13Q7L8C5 426 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 WDR5BQ86VZ2 330 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 C12orf40Q86WS4 652 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 IRF2BP1Q8IU81 584 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms