RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 EOGTQ5NDL2 527 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 EMC10Q5UCC4 262 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 TMEM92Q6UXU6 159 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 TMEM25Q86YD3 366 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 ENGASEQ8NFI3 743 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 MDGA1Q8NFP4 955 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 WBP2Q969T9 261 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 POLMQ9NP87 494 aaPredicted RBP22.2■■□□□ 1.14
VSX1-201ENST00000376707 CYLDQ9NQC7 956 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 RXFP3Q9NSD7 469 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 DEC1Q9P2X7 70 aa22.2■■□□□ 1.14
VSX1-201ENST00000376707 LSM7Q9UK45 103 aaKnown RBP22.2■■□□□ 1.14
VSX1-201ENST00000376707 RALGAPA1Q6GYQ0 2036 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 HHLA1C9JL84 531 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 SGK1O00141 431 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 TULP3O75386 442 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 PNOCQ13519 176 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 NUDT18Q6ZVK8 323 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 HTR3DQ70Z44 454 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 ETFBKMTQ8IXQ9 262 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 SMYD4Q8IYR2 804 aaPredicted RBP22.19■■□□□ 1.14
VSX1-201ENST00000376707 WHAMMQ8TF30 809 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 EEF2KMTQ96G04 330 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 KLF16Q9BXK1 252 aaPredicted RBP22.19■■□□□ 1.14
VSX1-201ENST00000376707 RMND1Q9NWS8 449 aa22.19■■□□□ 1.14
VSX1-201ENST00000376707 EML5Q05BV3 1969 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 BCLAF3A2AJT9 711 aaKnown RBP22.18■■□□□ 1.14
VSX1-201ENST00000376707 GOLGA6L4A6NEF3 574 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 CETN3O15182 167 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 STX10O60499 249 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 CAVIN2O95810 425 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 EPB41P11171 864 aaKnown RBP22.18■■□□□ 1.14
VSX1-201ENST00000376707 HNRNPLP14866 589 aaKnown RBP eCLIP22.18■■□□□ 1.14
VSX1-201ENST00000376707 MXI1P50539 228 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 ZNF394Q53GI3 561 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 COBLL1Q53SF7 1204 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 STPG1Q5TH74 334 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 PMS2CLQ68D20 193 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 PHTF2Q8N3S3 785 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 ZDHHC4Q9NPG8 344 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 OSER1Q9NX31 292 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 BCCIPQ9P287 314 aaKnown RBP eCLIP22.18■■□□□ 1.14
VSX1-201ENST00000376707 CIZ1Q9ULV3 898 aaPredicted RBP22.18■■□□□ 1.14
VSX1-201ENST00000376707 SDK1Q7Z5N4 2213 aa22.18■■□□□ 1.14
VSX1-201ENST00000376707 SPAG17Q6Q759 2223 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 A0A1W2PQH9 124 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 ADRB1P08588 477 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 CHRM1P11229 460 aaPredicted RBP22.17■■□□□ 1.14
VSX1-201ENST00000376707 RARGP13631 454 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 C10orf76Q5T2E6 689 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 PPP1R26Q5T8A7 1209 aaPredicted RBP22.17■■□□□ 1.14
VSX1-201ENST00000376707 TCEAL6Q6IPX3 200 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 TRMT11Q7Z4G4 463 aaKnown RBP22.17■■□□□ 1.14
VSX1-201ENST00000376707 TTC39CQ8N584 583 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 FBXL13Q8NEE6 735 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 SPATA20Q8TB22 786 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 TCEAL3Q969E4 200 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 HEXIM2Q96MH2 286 aaKnown RBP22.17■■□□□ 1.14
VSX1-201ENST00000376707 TIGD1Q96MW7 591 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 GSDMAQ96QA5 445 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 DUSP16Q9BY84 665 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 NMUR1Q9HB89 426 aa22.17■■□□□ 1.14
VSX1-201ENST00000376707 NEDD8-MDP1E9PL57 170 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 GREM1O60565 184 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 BCKDHBP21953 392 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 KIF11P52732 1056 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 C10orf120Q5SQS8 335 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 GRAMD4Q6IC98 578 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 KLHDC10Q6PID8 442 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 TADA2BQ86TJ2 420 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 PGBD3Q8N328 593 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 ZNF513Q8N8E2 541 aaPredicted RBP22.16■■□□□ 1.14
VSX1-201ENST00000376707 TERB1Q8NA31 727 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 OLIG1Q8TAK6 271 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 KCNV2Q8TDN2 545 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 HMGB4Q8WW32 186 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 SEMA4DQ92854 862 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 FAXDC2Q96IV6 333 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 SPACA7Q96KW9 195 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 XPO6Q96QU8 1125 aaKnown RBP22.16■■□□□ 1.14
VSX1-201ENST00000376707 BBS2Q9BXC9 721 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 CISHQ9NSE2 258 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 DNAJC17Q9NVM6 304 aaKnown RBP22.16■■□□□ 1.14
VSX1-201ENST00000376707 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.16■■□□□ 1.14
VSX1-201ENST00000376707 RAB20Q9NX57 234 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 DNMT3LQ9UJW3 386 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 NAGPAQ9UK23 515 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 NUDT5Q9UKK9 219 aa22.16■■□□□ 1.14
VSX1-201ENST00000376707 TCRBV21S2A2A0A5A6 115 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 MDM4O15151 490 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 ADAM23O75077 832 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 PRCPP42785 496 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 PLA2G4AP47712 749 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 PSEN1P49768 467 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 ZNF658Q5TYW1 1059 aaPredicted RBP22.15■■□□□ 1.14
VSX1-201ENST00000376707 TCERG1LQ5VWI1 586 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 RNF43Q68DV7 783 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 TPGS1Q6ZTW0 290 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 CCDC186Q7Z3E2 898 aa22.15■■□□□ 1.14
VSX1-201ENST00000376707 CYP2U1Q7Z449 544 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms