RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 PEAR1Q5VY43 1037 aaPredicted RBP12.89□□□□□ -0.35
LSM2-208ENST00000375661 DENND5BQ6ZUT9 1274 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 SV2AQ7L0J3 742 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 OSTM1Q86WC4 334 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 DDX42Q86XP3 938 aaKnown RBP eCLIP12.89□□□□□ -0.35
LSM2-208ENST00000375661 ADGRG2Q8IZP9 1017 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 CCDC33Q8N5R6 958 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 TTC16Q8NEE8 873 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 DEFB124Q8NES8 71 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 PNKPQ96T60 521 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 BPIFA3Q9BQP9 254 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 SYT15Q9BQS2 421 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 TTLL2Q9BWV7 592 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 THAP9Q9H5L6 903 aa12.89□□□□□ -0.35
LSM2-208ENST00000375661 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
LSM2-208ENST00000375661 ZNF840PA6NDX5 716 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.88□□□□□ -0.35
LSM2-208ENST00000375661 TRIM66O15016 1216 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 MAP3K13O43283 966 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 CYP17A1P05093 508 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 SPINK2P20155 84 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 GTF2H1P32780 548 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 RDXP35241 583 aaKnown RBP12.88□□□□□ -0.35
LSM2-208ENST00000375661 GRIK1P39086 918 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 TNFRSF4P43489 277 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 NOP14P78316 857 aaKnown RBP12.88□□□□□ -0.35
LSM2-208ENST00000375661 ZXDBP98169 803 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 MYL5Q02045 173 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 BIRC3Q13489 604 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 COL9A2Q14055 689 aaPredicted RBP12.88□□□□□ -0.35
LSM2-208ENST00000375661 DHCR24Q15392 516 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 PREPLQ4J6C6 727 aaPredicted RBP12.88□□□□□ -0.35
LSM2-208ENST00000375661 CBWD6Q4V339 395 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 HSP90AA4PQ58FG1 418 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 DCAF17Q5H9S7 520 aaPredicted RBP12.88□□□□□ -0.35
LSM2-208ENST00000375661 CBWD3Q5JTY5 395 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 CBWD5Q5RIA9 395 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 TCERG1LQ5VWI1 586 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 TMEM92Q6UXU6 159 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
LSM2-208ENST00000375661 IL17RCQ8NAC3 791 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 TXNDC5Q8NBS9 432 aaKnown RBP12.88□□□□□ -0.35
LSM2-208ENST00000375661 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 KCNV2Q8TDN2 545 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 TAS1R2Q8TE23 839 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 ZCCHC14Q8WYQ9 949 aaKnown RBP12.88□□□□□ -0.35
LSM2-208ENST00000375661 XYLT2Q9H1B5 865 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 HSD3B7Q9H2F3 369 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 TMEM8AQ9HCN3 771 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 FANCLQ9NW38 375 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 MSRB2Q9Y3D2 182 aa12.88□□□□□ -0.35
LSM2-208ENST00000375661 CACNA1GO43497 2377 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 PCDH15Q96QU1 1955 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 BAHCC1Q9P281 2608 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 H0Y626 953 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 KAT7O95251 611 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 TRIM16O95361 564 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 TOP3BO95985 862 aaKnown RBP12.87□□□□□ -0.35
LSM2-208ENST00000375661 ADH1CP00326 375 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 FAM163BP0C2L3 166 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
LSM2-208ENST00000375661 ENGP17813 658 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 KIR2DL1P43626 348 aaPredicted RBP12.87□□□□□ -0.35
LSM2-208ENST00000375661 ZNF165P49910 485 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 MYL6P60660 151 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 SEMA3BQ13214 749 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 NCOA4Q13772 614 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 HNRNPDQ14103 355 aaKnown RBP12.87□□□□□ -0.35
LSM2-208ENST00000375661 ACAP1Q15027 740 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 IQCB1Q15051 598 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 MAP7D1Q3KQU3 841 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 CDKAL1Q5VV42 579 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 LYSMD4Q5XG99 296 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 KRT39Q6A163 491 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 RABEPKQ7Z6M1 372 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 PIP4P1Q86T03 277 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 ALLCQ8N6M5 410 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 AOPEPQ8N6M6 819 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 MYLPFQ96A32 169 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 OTUB2Q96DC9 234 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 NAT10Q9H0A0 1025 aaKnown RBP12.87□□□□□ -0.35
LSM2-208ENST00000375661 BCCIPQ9P287 314 aaKnown RBP eCLIP12.87□□□□□ -0.35
LSM2-208ENST00000375661 TBC1D14Q9P2M4 693 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 PILRBQ9UKJ0 227 aa12.87□□□□□ -0.35
LSM2-208ENST00000375661 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.86□□□□□ -0.35
LSM2-208ENST00000375661 FAM221BA6H8Z2 402 aa12.86□□□□□ -0.35
LSM2-208ENST00000375661 SGK1O00141 431 aa12.86□□□□□ -0.35
LSM2-208ENST00000375661 AP5Z1O43299 807 aa12.86□□□□□ -0.35
LSM2-208ENST00000375661 STX10O60499 249 aa12.86□□□□□ -0.35
LSM2-208ENST00000375661 PHACTR2O75167 634 aa12.86□□□□□ -0.35
LSM2-208ENST00000375661 ATP2C2O75185 946 aa12.86□□□□□ -0.35
LSM2-208ENST00000375661 KLF8O95600 359 aaPredicted RBP12.86□□□□□ -0.35
LSM2-208ENST00000375661 STAU1O95793 577 aaKnown RBP12.86□□□□□ -0.35
LSM2-208ENST00000375661 OAS1P00973 400 aaKnown RBP12.86□□□□□ -0.35
LSM2-208ENST00000375661 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
LSM2-208ENST00000375661 HNRNPLP14866 589 aaKnown RBP eCLIP12.86□□□□□ -0.35
LSM2-208ENST00000375661 ZNF18P17022 549 aa12.86□□□□□ -0.35
LSM2-208ENST00000375661 WARSP23381 471 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms