RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 PRDM12Q9H4Q4 367 aa16.24■□□□□ 0.19
CCDC40-202ENST00000374876 CTNNB1P35222 781 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 ARSEP51690 589 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 ORC1Q13415 861 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 ALKAL1Q6UXT8 129 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 RELL1Q8IUW5 271 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 HAUS1Q96CS2 278 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 RBM15Q96T37 977 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 PRMT1Q99873 361 aaKnown RBP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 CCDC77Q9BR77 488 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 MRPL9Q9BYD2 267 aaKnown RBP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 SDCBP2Q9H190 292 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 SMYD3Q9H7B4 428 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 KANSL3Q9P2N6 904 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 CACNG4Q9UBN1 327 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 CYTH4Q9UIA0 394 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 DRG1Q9Y295 367 aaKnown RBP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 DNALI1O14645 258 aaPredicted RBP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 INPPL1O15357 1258 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 TCEA3O75764 348 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 CPP00450 1065 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 KRT7P08729 469 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 P4HA1P13674 534 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 ATICP31939 592 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 VCPP55072 806 aaKnown RBP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 PLCB3Q01970 1234 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 HADHQ16836 314 aaKnown RBP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 GPR153Q6NV75 609 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 CCDC121Q6ZUS5 278 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 ZMAT2Q96NC0 199 aaKnown RBP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 ZNF317Q96PQ6 595 aaPredicted RBP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 FAM193BQ96PV7 902 aaPredicted RBP16.23■□□□□ 0.19
CCDC40-202ENST00000374876 ASB7Q9H672 318 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 ZWILCHQ9H900 591 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 WDR35Q9P2L0 1181 aa16.23■□□□□ 0.19
CCDC40-202ENST00000374876 SMIM28A0A1B0GU29 152 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 THP07101 528 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 BCAR1P56945 870 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 GPS1Q13098 491 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 CNGA2Q16280 664 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 KYAT1Q16773 422 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 KCNT2Q6UVM3 1135 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 TMEM130Q8N3G9 435 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 GLIS1Q8NBF1 620 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 COLGALT1Q8NBJ5 622 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 SLC4A11Q8NBS3 891 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 FBXO22Q8NEZ5 403 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 JOSD2Q8TAC2 188 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 FNIP1Q8TF40 1166 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 TMEM176AQ96HP8 235 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 SNX27Q96L92 541 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 C9orf72Q96LT7 481 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 CPXM1Q96SM3 734 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 TJP2Q9UDY2 1190 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 NLRC5Q86WI3 1866 aa16.22■□□□□ 0.19
CCDC40-202ENST00000374876 TDRD15B5MCY1 1934 aaKnown RBP16.21■□□□□ 0.19
CCDC40-202ENST00000374876 KIAA1671Q9BY89 1806 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 TMEM265A0A087WTH1 108 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 CILPO75339 1184 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 LRCH4O75427 683 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 ITGAVP06756 1048 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 ZSCAN5DPP0CG00 497 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 MAGEA4P43358 317 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 IFNAR2P48551 515 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 SLC25A11Q02978 314 aaKnown RBP16.21■□□□□ 0.19
CCDC40-202ENST00000374876 SLC20A2Q08357 652 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 STAT4Q14765 748 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 SMTNL2Q2TAL5 461 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 XYLT1Q86Y38 959 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 COLGALT2Q8IYK4 626 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 KLHL23Q8NBE8 558 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 GDPD5Q8WTR4 605 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 DYDC1Q8WWB3 177 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 NKD2Q969F2 451 aaPredicted RBP16.21■□□□□ 0.19
CCDC40-202ENST00000374876 TWNKQ96RR1 684 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 CCDC134Q9H6E4 229 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 CYP3A43Q9HB55 503 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 ALG13Q9NP73 1137 aaKnown RBP16.21■□□□□ 0.19
CCDC40-202ENST00000374876 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
CCDC40-202ENST00000374876 CTNNAL1Q9UBT7 734 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 HMGXB4Q9UGU5 601 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 TPX2Q9ULW0 747 aaKnown RBP16.21■□□□□ 0.19
CCDC40-202ENST00000374876 ANK1P16157 1881 aa16.21■□□□□ 0.19
CCDC40-202ENST00000374876 SGK1O00141 431 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 MICAL2O94851 1124 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 CSPG5O95196 566 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 ERBB2P04626 1255 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 GALTP07902 379 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 SLC11A1P49279 550 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 ALDH7A1P49419 539 aaKnown RBP16.21■□□□□ 0.18
CCDC40-202ENST00000374876 PDE4CQ08493 712 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 ZNF268Q14587 947 aaPredicted RBP16.21■□□□□ 0.18
CCDC40-202ENST00000374876 TMEM132DQ14C87 1099 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 OASLQ15646 514 aaKnown RBP16.21■□□□□ 0.18
CCDC40-202ENST00000374876 XKR4Q5GH76 650 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 HPDLQ96IR7 371 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 PAAF1Q9BRP4 392 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 ELOVL4Q9GZR5 314 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 GOLGA2P5Q9HBQ8 144 aa16.21■□□□□ 0.18
CCDC40-202ENST00000374876 SAYSD1Q9NPB0 183 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms